ncRNA ID | novel_gma_miR227 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:27694050-27694147 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451629;SRR1451635;SRR1451646;SRR1451650;SRR1451605;SRR1451608;SRR1451617;SRR1451620 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUGAAUUGUCAAUCUGUAUGAAU - 24 |
Stem-loop(if miRNA) |
-- UG - A UUAUA A U C UA AAUUG UCA UCUGUAUGAA UGA UUG UAAU CGUAUGA || ||||| ||| |||||||||| ||| ||| |||| ||||||U AU UUAAC AGU AGGCAUAUUU ACU AAC AUUA GCAUACU AU GU U - UAAUG - U A |
Stem-loop sequence | UAUGAAUUGUCAAUCUGUAUGAAUUAUAUGAAUUGUUAAUCCGUAUGAUUCAUACGAAUUAUCAAUCAGUAAUUUUAUACGGAUGAUCAAUUUGUAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003549772.3 |
|
3.0 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g48250, chloroplastic-like (LOC100801257), mRNA | pentatricopeptide repeat-containing protein At3g48250, chloroplastic-like(LOC100801257) | coding protein | psRNATarget |