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BaseInfo

ncRNA ID novel_gma_miR225
Species Glycine max
Class miRNA
Genome position Chr18:10924641-10924739 [-]
Reference genome Glycine_max_v2.0
Source SRR1294478;SRR2045231;SRR2045232;SRR1295523
Length 24
Mature sequence(if miRNA) 76 - UUAUGUGGAGAAUUGUUAGGGGUC - 99
Stem-loop(if miRNA) ----UUA          U  UAG       A    AAG  GG   AUU     G
       UGUGGAGAAU GU   GGGUCAG CCAG   AA  UGA   UCAAG U
       |||||||||| ||   ||||||| ||||   ||  |||   |||||
       ACACCUUUUA CA   CUCGGUC GGUU   UU  AUU   AGUUU A
UAAAUUA          -  --A       -    GGA  AA   ---     G
Stem-loop sequence UUAUGUGGAGAAUUGUUAGGGGUCAGACCAGAAGAAGGUGAAUUUCAAGGUAGUUUGAUUAAAUUAGGUUGGCUGGCUCAACAUUUUCCACAAUUAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT093774.1
ncRNA:24   CUGG--GGAUUGUUAAGAGGUGUAUU   1
  *||=--||||*||*||||||||||||
targets:403   AACUGACCUAUCACUUCUCCACAUAA   428

2.5 Soybean clone JCVI-FLGm-14C16 unknown mRNA NA coding protein psRNATarget
XM_006600276.2
ncRNA:24   CUGGGGAUUGUUAAGAGGUGUAUU   1
  **|==|||*|||||*|||||||||
targets:2132   UUCUUCUAUCAAUUAUCCACAUAA   2155

2.5 PREDICTED: Glycine max uncharacterized LOC102663211 (LOC102663211), mRNA uncharacterized LOC102663211(LOC102663211) coding protein psRNATarget