ncRNA ID | novel_gma_miR221 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:28535631-28535686 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AUGUAUAGAUAGUCGAUGUUAAC - 23 |
Stem-loop(if miRNA) |
--AUG    G   GU         CUUA      UAUA AUA  CGAUGUUAA    U      |||| |||  |||||||||      AUAU UAU  GCUACAAUU    G AAUAA    G   UG         ACAU |
Stem-loop sequence | AUGUAUAGAUAGUCGAUGUUAACUUAUGUACAUUAACAUCGGUUAUGUAUAAAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003521869.3 |
|
2.0 | PREDICTED: Glycine max suppressor protein SRP40-like (LOC100804145), mRNA | suppressor protein SRP40-like(LOC100804145) | coding protein | psRNATarget | |||||||||
XM_014779276.1 |
|
2.5 | PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial (LOC100800686), transcript variant X4, mRNA | putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial(LOC100800686) | coding protein | psRNATarget |