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BaseInfo

ncRNA ID novel_gma_miR221
Species Glycine max
Class miRNA
Genome position Chr10:28535631-28535686 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628
Length 23
Mature sequence(if miRNA) 1 - AUGUAUAGAUAGUCGAUGUUAAC - 23
Stem-loop(if miRNA) --AUG    G   GU         CUUA
     UAUA AUA  CGAUGUUAA    U
     |||| |||  |||||||||
     AUAU UAU  GCUACAAUU    G
AAUAA    G   UG         ACAU
Stem-loop sequence AUGUAUAGAUAGUCGAUGUUAACUUAUGUACAUUAACAUCGGUUAUGUAUAAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003521869.3
ncRNA:23   CAAUUGUAGCUGAUAGAUAUGUA   1
  *|*==|||=||||||||||||||
targets:1367   CUCGGCAUUGACUAUCUAUACAU   1389

2.0 PREDICTED: Glycine max suppressor protein SRP40-like (LOC100804145), mRNA suppressor protein SRP40-like(LOC100804145) coding protein psRNATarget
XM_014779276.1
ncRNA:23   CAAUUGUAGCUGAUAGAUAUGUA   1
  *****|||||||*||||||||||
targets:235   CCCCCCAUCGACCAUCUAUACAU   257

2.5 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial (LOC100800686), transcript variant X4, mRNA putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial(LOC100800686) coding protein psRNATarget