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BaseInfo

ncRNA ID novel_gma_miR219
Species Glycine max
Class miRNA
Genome position Chr1:25275621-25275724 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451631;SRR1451633;SRR1294478;SRR1451635;SRR1451636;SRR1451641;SRR1451642;SRR1451644;SRR1451648;SRR1451648;SRR1451649;SRR1451650;SRR1451652;SRR1451652;SRR1451655;SRR1451657;SRR1451658;SRR1451663;SRR1294484;SRR1294485;SRR1753105;SRR1753105;SRR2045230;SRR1292924;SRR3160566;SRR1295517;SRR1295522;SRR1295524;SRR1292926;SRR1295525;SRR1295527;SRR1295530;SRR1451604;SRR1451605;SRR1451618;SRR1451618;SRR1451620;SRR1451622;SRR1451626
Length 22
Mature sequence(if miRNA) 83 - UUGGGAAUUAAAAUGUAAACUU - 104
Stem-loop(if miRNA) --               UU        -C   G        A  CA      A
  GUUUAUAUUUUAAUU  CAAAAGGU  CUU CUGUUAAA UU  UUAACU A
  |||||||||||||||  ||||||||  ||| |||||||| ||  |||||| C
  CAAAUGUAAAAUUAA  GUUUUCCA  GAA GGCAAUUU AA  AAUUGA G
UU               GG        AA   -        -  AA      A
Stem-loop sequence GUUUAUAUUUUAAUUUUCAAAAGGUCCUUGCUGUUAAAAUUCAUUAACUAACGAAGUUAAAAAAUUUAACGGAAGAAACCUUUUGGGAAUUAAAAUGUAAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098127.1
ncRNA:22   UUCAAAUGUAAAAUUAAGGGUU   1
  =**|||=|||||||||*|||||
targets:390   GCAUUUGCAUUUUAAUCCCCAA   411

2.5 Soybean clone JCVI-FLGm-12G1 unknown mRNA NA coding protein psRNATarget