ncRNA ID | novel_gma_miR219 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:25275621-25275724 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628;SRR1451631;SRR1451633;SRR1294478;SRR1451635;SRR1451636;SRR1451641;SRR1451642;SRR1451644;SRR1451648;SRR1451648;SRR1451649;SRR1451650;SRR1451652;SRR1451652;SRR1451655;SRR1451657;SRR1451658;SRR1451663;SRR1294484;SRR1294485;SRR1753105;SRR1753105;SRR2045230;SRR1292924;SRR3160566;SRR1295517;SRR1295522;SRR1295524;SRR1292926;SRR1295525;SRR1295527;SRR1295530;SRR1451604;SRR1451605;SRR1451618;SRR1451618;SRR1451620;SRR1451622;SRR1451626 |
Length | 22 |
Mature sequence(if miRNA) | 83 - UUGGGAAUUAAAAUGUAAACUU - 104 |
Stem-loop(if miRNA) |
--               UU        -C   G        A  CA      A   GUUUAUAUUUUAAUU  CAAAAGGU  CUU CUGUUAAA UU  UUAACU A   |||||||||||||||  ||||||||  ||| |||||||| ||  |||||| C   CAAAUGUAAAAUUAA  GUUUUCCA  GAA GGCAAUUU AA  AAUUGA G UU               GG        AA   -        -  AA      A |
Stem-loop sequence | GUUUAUAUUUUAAUUUUCAAAAGGUCCUUGCUGUUAAAAUUCAUUAACUAACGAAGUUAAAAAAUUUAACGGAAGAAACCUUUUGGGAAUUAAAAUGUAAACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT098127.1 |
|
2.5 | Soybean clone JCVI-FLGm-12G1 unknown mRNA | NA | coding protein | psRNATarget |