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BaseInfo

ncRNA ID novel_gma_miR217
Species Glycine max
Class miRNA
Genome position Chr12:20152711-20152781 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628
Length 25
Mature sequence(if miRNA) 47 - AGUCUUUUACGGAUCAACUUGAUCA - 71
Stem-loop(if miRNA) --     C        C         UCA      A
  AUCAA UUGAUCCG AGGAGACUU   CGGAUC A
  ||||| |||||||| |||||||||   |||||| A
  UAGUU AACUAGGC UUUUCUGAG   GCCUAG U
AC     C        A         --C      U
Stem-loop sequence AUCAACUUGAUCCGCAGGAGACUUUCACGGAUCAAAUUGAUCCGCGAGUCUUUUACGGAUCAACUUGAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600975.2
ncRNA:25   ACUAGUUCAACUAGGCAUUUUCUGA   1
  *|||=||*||||||||||||||*||
targets:1227   AGAUUAACUUGAUCCGUAAAAGCCU   1251

2.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget