ncRNA ID | novel_gma_miR205 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:47704169-47704250 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CCCUCAAAGGCUUCCAGUAUU - 21 |
Stem-loop(if miRNA) |
--  C        U          CCGU   C    AUAUAU   CC UCAAAGGC UCCAGUAUUC    AUU AUUC      A   || |||||||| ||||||||||    ||| ||||      C   GG AGUUUCUG AGGUCGUAAG    UAG UAAG      C AA  A        U          ---U   U    AUCGAU |
Stem-loop sequence | CCCUCAAAGGCUUCCAGUAUUCCCGUAUUCAUUCAUAUAUACCUAGCUAGAAUUGAUUGAAUGCUGGAUGUCUUUGAAGGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003525617.3 |
|
1.0 | PREDICTED: Glycine max scarecrow-like protein 21 (LOC100815959), mRNA | scarecrow-like protein 21(LOC100815959) | coding protein | psRNATarget | |||||||||
XM_003550815.3 |
|
1.0 | PREDICTED: Glycine max scarecrow-like protein 21 (LOC100813548), mRNA | scarecrow-like protein 21(LOC100813548) | coding protein | psRNATarget | |||||||||
XM_006592868.2 |
|
1.0 | PREDICTED: Glycine max TPR repeat-containing thioredoxin TTL1-like (LOC100804531), mRNA | TPR repeat-containing thioredoxin TTL1-like(LOC100804531) | coding protein | psRNATarget |