ncRNA ID | novel_gma_miR202 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:3896600-3896711 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628;SRR1451636;SRR835762;DRR031984;SRR1451612;SRR1451615;SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 92 - GCUCUCUAUACUUCUGUCAUC - 112 |
Stem-loop(if miRNA) |
--         -              U  -   U       ---------U  UAUAAUAU   UGACAGAAG AUAGAGAGCACAGA GA UGA AUGCAUA          UA        A   ||||||||| |||||||||||||| || ||| |||||||          ||        U   ACUGUCUUC UAUCUCUCGUGUUU CU AUU UACGUGU          UC        A CU         A              C  C   C       UAAGUAGUAC  AAGGGACG |
Stem-loop sequence | UGACAGAAGAUAGAGAGCACAGAUGAUGAUAUGCAUAUUAUAUAAUAUAUAGCAGGGAACUCAUGAUGAAUUGUGCAUCUUACUCCUUUGUGCUCUCUAUACUUCUGUCAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014774400.1 |
|
1.5 | PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At2g16250 (LOC100805769), mRNA | probable LRR receptor-like serine/threonine-protein kinase At2g16250(LOC100805769) | coding protein | psRNATarget | |||||||||
NM_001251353.2 |
|
2.5 | Glycine max uncharacterized LOC100527585 (LOC100527585), mRNA | uncharacterized LOC100527585(LOC100527585) | coding protein | psRNATarget | |||||||||
BT092436.1 |
|
2.5 | Soybean clone JCVI-FLGm-10N20 unknown mRNA | NA | coding protein | psRNATarget |