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BaseInfo

ncRNA ID novel_gma_miR201
Species Glycine max
Class miRNA
Genome position Chr8:19578208-19578329 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451640;SRR1451645;SRR835761;SRR835771;SRR835772;SRR1451621
Length 21
Mature sequence(if miRNA) 102 - UAGUUAUGGUUUUAGGCUUAU - 122
Stem-loop(if miRNA) --   G                                      U          CA AGA
  AAG CUAAAACCAUAACUAAAUUAAGCAAAGUUAAUAGAAUU AGCAAUUUUA  G   C
  ||| |||||||||||||||||||||||||||||||||||||| ||||||||||  |
  UUC GAUUUUGGUAUUGAUUUAAUUCGUUUCGAUUAUUUUAA UCGUUAAGAU  C   U
UA   G                                      C          CA GGA
Stem-loop sequence AAGGCUAAAACCAUAACUAAAUUAAGCAAAGUUAAUAGAAUUUAGCAAUUUUACAGAGACUAGGCACUAGAAUUGCUCAAUUUUAUUAGCUUUGCUUAAUUUAGUUAUGGUUUUAGGCUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549615.3
ncRNA:21   UAUUCGGAUUUUGGUAUUGAU   1
  |*||*|||||||||*||||||
targets:5   AAAACCCUAAAACCCUAACUA   25

2.5 PREDICTED: Glycine max uncharacterized LOC100806052 (LOC100806052), mRNA uncharacterized LOC100806052(LOC100806052) coding protein psRNATarget