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BaseInfo

ncRNA ID novel_gma_miR198
Species Glycine max
Class miRNA
Genome position Chr18:37694594-37694676 [-]
Reference genome Glycine_max_v2.0
Source SRR1294478;SRR1294479;SRR2045231
Length 25
Mature sequence(if miRNA) 59 - UCUCAACAACCCCAAAACCCAUGUU - 83
Stem-loop(if miRNA) --            C     C          UUUUUUA   UGA
  UCUCAACAACCC AAAAC CAUGUUUUCA       CUA   A
  |||||||||||| ||||| ||||||||||       |||   G
  AGAGUUGUUGGG UUUUG GUACAAAAGU       GGU   C
GA            -     U          -----UG   UCA
Stem-loop sequence UCUCAACAACCCCAAAACCCAUGUUUUCAUUUUUUACUAUGAAGCACUUGGGUUGAAAACAUGUGUUUUGGGUUGUUGAGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771246.1
ncRNA:25   UUGUACCCAAAACCCCAACAACUCU   1
  |||*||*||||||||||||*|||||
targets:787   AACUUGUGUUUUGGGGUUGCUGAGA   811

2.5 PREDICTED: Glycine max uncharacterized LOC102665297 (LOC102665297), transcript variant X2, mRNA uncharacterized LOC102665297(LOC102665297) coding protein psRNATarget