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BaseInfo

ncRNA ID novel_gma_miR193
Species Glycine max
Class miRNA
Genome position Chr7:28054928-28054965 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451629;SRR1451630;SRR1451632;SRR1451633;SRR1451635;SRR1451636;SRR1451637;SRR1451638;SRR1451639;SRR1451640;SRR1451641;SRR1451642;SRR1451643;SRR1451644;SRR1451645;SRR1451646;SRR1451647;SRR1451650;SRR1294482;SRR1451654;SRR1451655;SRR1294483;SRR1451657;SRR1451658;SRR1451660;SRR1451661;SRR1451663;SRR1292924;SRR1753104;SRR1753107;SRR1753108;SRR2045230;SRR2045234;SRR2045235;SRR1294487;SRR2045372;SRR1292925;SRR1295522;SRR1295524;SRR1295525;SRR1292926;SRR1295526;SRR1295527;SRR1295528;SRR1295529;SRR1295530;SRR1292928;SRR1295531;SRR1451607;SRR1451609;SRR1451611;SRR1292929;SRR1294474;SRR1451615;SRR1294475;SRR1451617;SRR1294476;SRR1451620;SRR1451621;SRR1451623;SRR1451624;SRR1451625;SRR1451626
Length 19
Mature sequence(if miRNA) 1 - UCUCUCAAUGAAAGCACCA - 19
Stem-loop(if miRNA) --       A G A     
  UCUCUCA U A AGCACC
  ||||||| | | |||||A
  AGAGAGU A U UUGUGA
UA       - G A     
Stem-loop sequence UCUCUCAAUGAAAGCACCAAGUGUUAUGAUGAGAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762858.1
ncRNA:19   ACCACGAAAGUAACUCUCU   1
  ||||||||||||||||||*
targets:71   UGGUGCUUUCAUUGAGAGC   89

1.0 PREDICTED: Glycine max uncharacterized LOC106794943 (LOC106794943), mRNA uncharacterized LOC106794943(LOC106794943) coding protein psRNATarget
XM_006603098.2
ncRNA:19   ACCACGAAAGUAACUCUCU   1
  ||||||||||||||||||*
targets:641   UGGUGCUUUCAUUGAGAGC   659

1.0 PREDICTED: Glycine max ras-associated and pleckstrin homology domains-containing protein 1-like (LOC102666882), mRNA ras-associated and pleckstrin homology domains-containing protein 1-like(LOC102666882) coding protein psRNATarget
XM_014775790.1
ncRNA:19   ACCACGAAAGUAACUCUCU   1
  ||||*|||||||||||||*
targets:251   UGGUACUUUCAUUGAGAGC   269

2.0 PREDICTED: Glycine max uncharacterized LOC106798745 (LOC106798745), mRNA uncharacterized LOC106798745(LOC106798745) coding protein psRNATarget
XM_003532372.3
ncRNA:19   ACCACGAAAGUAACUCUCU   1
  *||||||||=|||||||||
targets:573   AGGUGCUUUUAUUGAGAGA   591

2.5 PREDICTED: Glycine max RING-H2 zinc finger protein RHA1a-like (LOC100817079), mRNA RING-H2 zinc finger protein RHA1a-like(LOC100817079) coding protein psRNATarget
XM_003523162.3
ncRNA:19   ACCACGAAAGUAACUCUCU   1
  *|*|||||||||||||||=
targets:2701   AGAUGCUUUCAUUGAGAGG   2719

3.0 PREDICTED: Glycine max probable glucan 1,3-alpha-glucosidase (LOC100817168), mRNA probable glucan 1,3-alpha-glucosidase(LOC100817168) coding protein psRNATarget
AK285408.1
ncRNA:19   ACCACGAAAGUAACUCUCU   1
  *|*|||||||||||||||=
targets:2682   AGAUGCUUUCAUUGAGAGG   2700

3.0 Glycine max cDNA, clone: GMFL01-08-P14 NA coding protein psRNATarget
XM_003533870.3
ncRNA:19   ACCACGAAAGUAACUCUCU   1
  |*|*||||||||||||||=
targets:626   UAGAGCUUUCAUUGAGAGG   644

3.0 PREDICTED: Glycine max uncharacterized LOC100779304 (LOC100779304), mRNA uncharacterized LOC100779304(LOC100779304) coding protein psRNATarget