ncRNA ID | novel_gma_miR192 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:4705087-4705170 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628;SRR1451631;SRR1451633;SRR1451639;SRR1451644;SRR1451645;SRR1451649;SRR2968974;SRR1295516;SRR835759;SRR835762;SRR835765;SRR835768;SRR835770;SRR835771;SRR835772;DRR031984;SRR1451605;SRR1451613;SRR1451614;SRR1451621;SRR1451623;SRR1451627 |
Length | 22 |
Mature sequence(if miRNA) | 1 - GCUCACUUCUCUUUCUGUCAAC - 22 |
Stem-loop(if miRNA) |
--        -    -        A        CU       G   UGACAGAA GAGA GUGAGCAC CAGAGGCA  UGGUAUA U   |||||||| |||| |||||||| ||||||||  ||||||| A   ACUGUCUU CUCU CACUCGUG GUUUUCGU  AUCAUAU U CA        U    U        C        -U       A |
Stem-loop sequence | UGACAGAAGAGAGUGAGCACACAGAGGCACUUGGUAUAGUAUAUAUACUAUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HI410467.1 |
|
1.5 | Sequence 8592 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB170928.1 |
|
1.5 | Sequence 8592 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ242597.1 |
|
1.5 | Sequence 8592 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
XM_014768596.1 |
|
2.5 | PREDICTED: Glycine max metallophosphoesterase 1-like (LOC102667430), mRNA | metallophosphoesterase 1-like(LOC102667430) | coding protein | psRNATarget |