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BaseInfo

ncRNA ID novel_gma_miR192
Species Glycine max
Class miRNA
Genome position Chr6:4705087-4705170 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451631;SRR1451633;SRR1451639;SRR1451644;SRR1451645;SRR1451649;SRR2968974;SRR1295516;SRR835759;SRR835762;SRR835765;SRR835768;SRR835770;SRR835771;SRR835772;DRR031984;SRR1451605;SRR1451613;SRR1451614;SRR1451621;SRR1451623;SRR1451627
Length 22
Mature sequence(if miRNA) 1 - GCUCACUUCUCUUUCUGUCAAC - 22
Stem-loop(if miRNA) --        -    -        A        CU       G
  UGACAGAA GAGA GUGAGCAC CAGAGGCA  UGGUAUA U
  |||||||| |||| |||||||| ||||||||  ||||||| A
  ACUGUCUU CUCU CACUCGUG GUUUUCGU  AUCAUAU U
CA        U    U        C        -U       A
Stem-loop sequence UGACAGAAGAGAGUGAGCACACAGAGGCACUUGGUAUAGUAUAUAUACUAUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410467.1
ncRNA:22   CAACUGUCUUUCUCUUCACUCG   1
  ***|||||||||||*|||||||
targets:7   ACCGACAGAAAGAGUAGUGAGC   28

1.5 Sequence 8592 from Patent EP2074227 NA coding protein psRNATarget
JB170928.1
ncRNA:22   CAACUGUCUUUCUCUUCACUCG   1
  ***|||||||||||*|||||||
targets:7   ACCGACAGAAAGAGUAGUGAGC   28

1.5 Sequence 8592 from Patent EP2559767 NA coding protein psRNATarget
LQ242597.1
ncRNA:22   CAACUGUCUUUCUCUUCACUCG   1
  ***|||||||||||*|||||||
targets:7   ACCGACAGAAAGAGUAGUGAGC   28

1.5 Sequence 8592 from Patent EP2985353 NA coding protein psRNATarget
XM_014768596.1
ncRNA:22   CAACUGUCUUUCUCUUCACUCG   1
  ***|||||=|||||*|||||||
targets:852   AAAGACAGGAAGAGCAGUGAGC   873

2.5 PREDICTED: Glycine max metallophosphoesterase 1-like (LOC102667430), mRNA metallophosphoesterase 1-like(LOC102667430) coding protein psRNATarget