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BaseInfo

ncRNA ID novel_gma_miR190
Species Glycine max
Class miRNA
Genome position Chr6:40647444-40647501 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451629;SRR1451631;SRR1451633;SRR1451635;SRR1451639;SRR1451640;SRR1451642;SRR1451646;SRR1451657;SRR1451660;SRR1753104;SRR1753105;SRR1753107;SRR2968974;SRR2968978;SRR835767;SRR835771;SRR1451606;SRR1451607;SRR1451608;SRR1451609;SRR1451611;SRR1451612;SRR1451613;SRR1451615;SRR1451618;SRR1451619;SRR1451624;SRR1451625;SRR1451626;SRR1451627
Length 22
Mature sequence(if miRNA) 37 - UUACUGAGAGUAUGUUGAUGCU - 58
Stem-loop(if miRNA) --       -    AUGU   UGCUUUUCA
  UUACUGA GAGU    UGA         U
  ||||||| ||||    |||         U
  AGUGACU CUCA    GAU         C
AA       U    --AC   AAAACUUAU
Stem-loop sequence UUACUGAGAGUAUGUUGAUGCUUUUCAUUCUAUUCAAAAUAGCAACUCUUCAGUGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768771.1
ncRNA:22   UCGUAGUUGUAUGAGAGUCAUU   1
  *|=|*||||||||||||||*||
targets:3253   CGUAACAACAUACUCUCAGGAA   3274

2.5 PREDICTED: Glycine max leucine-rich repeat receptor protein kinase EMS1-like (LOC100803311), mRNA leucine-rich repeat receptor protein kinase EMS1-like(LOC100803311) coding protein psRNATarget