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BaseInfo

ncRNA ID novel_gma_miR178
Species Glycine max
Class miRNA
Genome position Chr18:48608542-48608633 [-]
Reference genome Glycine_max_v2.0
Source SRR1294478
Length 22
Mature sequence(if miRNA) 71 - AGGUAAUGAGUCAAGCUUAAGC - 92
Stem-loop(if miRNA) -----A  U           C       -----    --GUA    A   A
      GG AAUGAGUCAAG UUAAGCC     UUGC     UUGA CUU A
      || ||||||||||| |||||||     ||||     |||| ||| G
      CC UUACUCAGUUC AGUUCGG     AAUG     AACU GAA U
UCCCCA  U           -       UUCAA    AUCCA    C   C
Stem-loop sequence AGGUAAUGAGUCAAGCUUAAGCCUUGCGUAUUGAACUUAAGUCAAGCUCAAACCUAGUAAAACUUGGCUUGACUUGACUCAUUUCCACCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098964.1
ncRNA:22   CGAAUUCGAACUGAGUAAUGGA   1
  |*||=*|||||||||||||||*
targets:539   GGUUGUGCUUGACUCAUUACCC   560

3.0 Soybean clone JCVI-FLGm-13G6 unknown mRNA NA coding protein psRNATarget