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BaseInfo

ncRNA ID	novel_gma_miR177
Species	Glycine max
Class	miRNA
Genome position	Chr5:38863161-38863342 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451628;SRR1451641;SRR1451642;SRR1451624
Length	22
Mature sequence(if miRNA)	161 - UUUGGCAACAUUUGAUUUAGGC - 182
Stem-loop(if miRNA)	--                G        A     U  U              C                            UCCGUCUAUUA     U   CUAAAUCAAAUGUUGU AAACCAAA UAAUG CC AGGAAGUAGCUCAU UAAUGAAAUUGGUGACAUUGAUGGGCUA           GAUAA U   |||||||||||||||| |||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||||||           |||||   GAUUUAGUUUACAACG UUUGGUUU AUUAU GG UCCUUCAUCGAGUA AUUACUUUAACCACUGUAACUACCUGAU           UUAUU G CG                G        -     C  U              U                            -----------     U
Stem-loop sequence	CUAAAUCAAAUGUUGUGAAACCAAAAUAAUGUCCUAGGAAGUAGCUCAUCUAAUGAAAUUGGUGACAUUGAUGGGCUAUCCGUCUAUUAGAUAAUUGUUUAUUUAGUCCAUCAAUGUCACCAAUUUCAUUAUAUGAGCUACUUCCUUGGCUAUUAUUUGGUUUGGCAACAUUUGAUUUAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014777631.1	ncRNA:22   CGGAUUUAGUUUACAACGGUUU   1   **|*||||||||||*||||||| targets:571   AACAAAAUCAAAUGGUGCCAAA   592 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like (LOC100789058), transcript variant X3, mRNA	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like(LOC100789058)	coding protein	psRNATarget
XM_003529902.3	ncRNA:22   CGGAUUUAGUUUACAACGGUUU   1   **|*||||||||||*||||||| targets:744   AACAAAAUCAAAUGGUGCCAAA   765 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like (LOC100789058), transcript variant X2, mRNA	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like(LOC100789058)	coding protein	psRNATarget
XM_006582963.2	ncRNA:22   CGGAUUUAGUUUACAACGGUUU   1   **|*||||||||||*||||||| targets:744   AACAAAAUCAAAUGGUGCCAAA   765 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like (LOC100789058), transcript variant X1, mRNA	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like(LOC100789058)	coding protein	psRNATarget
XM_003531581.3	ncRNA:22   CGGAUUUAGUUUACAACGGUUU   1   **|*||||||||||*||||||| targets:757   AACAAAAUCAAAUGGUGCCAAA   778 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like (LOC100786941), transcript variant X2, mRNA	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like(LOC100786941)	coding protein	psRNATarget
XM_006585466.2	ncRNA:22   CGGAUUUAGUUUACAACGGUUU   1   **|*||||||||||*||||||| targets:757   AACAAAAUCAAAUGGUGCCAAA   778 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like (LOC100786941), transcript variant X1, mRNA	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like(LOC100786941)	coding protein	psRNATarget