ncRNA ID | novel_gma_miR168 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:22567108-22567234 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628;SRR1451630;SRR1451631;SRR1451632;SRR1451633;SRR1451634;SRR1451635;SRR1451636;SRR1451637;SRR1451638;SRR1451639;SRR1451640;SRR1451641;SRR1451642;SRR1451643;SRR1451644;SRR1451645;SRR1451647;SRR1451648;SRR1451649;SRR1451650;SRR1451652;SRR1451653;SRR1292924;SRR1451654;SRR1451655;SRR1451658;SRR1451660;SRR1451661;SRR1451662;SRR1294484;SRR1451663;SRR1451664;SRR1294485;SRR1753104;SRR1753105;SRR2045228;SRR2045236;SRR3160568;SRR3160569;SRR1295519;SRR1295520;SRR1295521;SRR1295524;SRR1295527;SRR1295530;SRR1451604;SRR1451605;SRR1451608;SRR1451609;SRR1451610;SRR1292929;SRR1451612;SRR1451614;SRR1451616;SRR1451617;SRR1451618;SRR1451619;SRR1451620;SRR1451621;SRR1451622;SRR1451623;SRR1451624;SRR1451625;SRR1451626;SRR1451627 |
Length | 24 |
Mature sequence(if miRNA) | 104 - UUCCGAAUAACCGACUUAGAAAUC - 127 |
Stem-loop(if miRNA) |
--A       A         AU          A  UU  -   -----------     AA     UUC    UUCUAAG CGGUUGUUC  AACCGCCUUA AA  UG CGU           UGUAA  AUCAA   U    ||||||| |||||||||  |||||||||| ||  || |||           |||||  |||||   C    AAGAUUC GCCAAUAAG  UUGGUGGAAU UU  AC GCG           ACAUU  UAGUU   A CUA       A         CC          A  UC  U   CCACCGUUUGA     AA     UCG |
Stem-loop sequence | AUUCUAAGACGGUUGUUCAUAACCGCCUUAAAAUUUGCGUUGUAAAAAUCAAUUCUCAGCUUUGAUAAUUACAAGUUUGCCACCGCGUCACUUUAUAAGGUGGUUCCGAAUAACCGACUUAGAAAUC |