ncRNA ID | novel_gma_miR164 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:14793334-14793492 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628 |
Length | 24 |
Mature sequence(if miRNA) | 136 - AACAUUCAAAGACGGUUAUUAGCU - 159 |
Stem-loop(if miRNA) |
--    A             A  -----     ---U         AA G                              -  U   UUAA AACCGUCUUUGAA GU     AAGAA    CAUUCAAAG  G UUAUUAGCUAAUAACCGUCUUUGAAUGUUA UG C   |||| ||||||||||||| ||     |||||    |||||||||  | |||||||||||||||||||||||||||||| ||   GAUU UUGGCAGAAACUU CA     UUCUU    GUAAGUUUC  C AAUAAUCGAUUAUUGGCAGAAACUUACAGU GC U UC    A             A  AUUUC     CGUU         CG A                              U  G |
Stem-loop sequence | UUAAAAACCGUCUUUGAAAGUAAGAAUCAUUCAAAGAAGGUUAUUAGCUAAUAACCGUCUUUGAAUGUUAUGUCUGCGUUGACAUUCAAAGACGGUUAUUAGCUAAUAAACGCCUUUGAAUGUUGCUUCUUCUUUAACAUUCAAAGACGGUUAUUAGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
1.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
2.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
2.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget |