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BaseInfo

ncRNA ID novel_gma_miR164
Species Glycine max
Class miRNA
Genome position Chr4:14793334-14793492 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628
Length 24
Mature sequence(if miRNA) 136 - AACAUUCAAAGACGGUUAUUAGCU - 159
Stem-loop(if miRNA) --    A             A  -----     ---U         AA G                              -  U
  UUAA AACCGUCUUUGAA GU     AAGAA    CAUUCAAAG  G UUAUUAGCUAAUAACCGUCUUUGAAUGUUA UG C
  |||| ||||||||||||| ||     |||||    |||||||||  | |||||||||||||||||||||||||||||| ||
  GAUU UUGGCAGAAACUU CA     UUCUU    GUAAGUUUC  C AAUAAUCGAUUAUUGGCAGAAACUUACAGU GC U
UC    A             A  AUUUC     CGUU         CG A                              U  G
Stem-loop sequence UUAAAAACCGUCUUUGAAAGUAAGAAUCAUUCAAAGAAGGUUAUUAGCUAAUAACCGUCUUUGAAUGUUAUGUCUGCGUUGACAUUCAAAGACGGUUAUUAGCUAAUAAACGCCUUUGAAUGUUGCUUCUUCUUUAACAUUCAAAGACGGUUAUUAGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   UCGAUUAUUGGCAGAAACUUACAA   1
  |*|||||||||||||||||||||*
targets:1617   AACUAAUAACCGUCUUUGAAUGUC   1640

1.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UCGAUUAUUGGCAGAAACUUACAA   1
  |*||||||||=||||||||||||*
targets:1507   AACUAAUAACUGUCUUUGAAUGUC   1530

2.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UCGAUUAUUGGCAGAAACUUACAA   1
  |*|||||||||*|||||||||||*
targets:1562   AACUAAUAACCAUCUUUGAAUGUC   1585

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget