ncRNA ID | novel_gma_miR162 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:37166716-37166833 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628 |
Length | 21 |
Mature sequence(if miRNA) | 98 - AACUUCUCUCUACAUGCUAAA - 118 |
Stem-loop(if miRNA) |
--          UAC                        -AACU    UG     GUUA   AACUUCUCUC   AUGCUAAAAUCAACUUAUGUACUU     UUUG  GAAGU    G   ||||||||||   ||||||||||||||||||||||||     ||||  |||||    C   UUGGAGAGAG   UAUGAUUUUAGUUGAAUAUGUGAA     AAAC  CUUUA    A AC          UUA                        AUCGU    CU     AUCU |
Stem-loop sequence | AACUUCUCUCUACAUGCUAAAAUCAACUUAUGUACUUAACUUUUGUGGAAGUGUUAGCAUCUAAUUUCUCCAAAUGCUAAAGUGUAUAAGUUGAUUUUAGUAUAUUGAGAGAGGUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003544299.3 |
|
2.5 | PREDICTED: Glycine max probable acyl-activating enzyme 6 (LOC100805819), mRNA | probable acyl-activating enzyme 6(LOC100805819) | coding protein | psRNATarget |