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BaseInfo

ncRNA ID novel_gma_miR162
Species Glycine max
Class miRNA
Genome position Chr3:37166716-37166833 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628
Length 21
Mature sequence(if miRNA) 98 - AACUUCUCUCUACAUGCUAAA - 118
Stem-loop(if miRNA) --          UAC                        -AACU    UG     GUUA
  AACUUCUCUC   AUGCUAAAAUCAACUUAUGUACUU     UUUG  GAAGU    G
  ||||||||||   ||||||||||||||||||||||||     ||||  |||||    C
  UUGGAGAGAG   UAUGAUUUUAGUUGAAUAUGUGAA     AAAC  CUUUA    A
AC          UUA                        AUCGU    CU     AUCU
Stem-loop sequence AACUUCUCUCUACAUGCUAAAAUCAACUUAUGUACUUAACUUUUGUGGAAGUGUUAGCAUCUAAUUUCUCCAAAUGCUAAAGUGUAUAAGUUGAUUUUAGUAUAUUGAGAGAGGUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544299.3
ncRNA:21   AAAUCGUACAUCUCUCUUCAA   1
  **|*||||||||||*||||||
targets:1937   AGUCGCAUGUAGAGUGAAGUU   1957

2.5 PREDICTED: Glycine max probable acyl-activating enzyme 6 (LOC100805819), mRNA probable acyl-activating enzyme 6(LOC100805819) coding protein psRNATarget