| ncRNA ID | ath-miR5019 |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr2:10403230-10403370 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 106 - UGUUGGGAAAGAAAAACUCUU - 126 |
| Stem-loop(if miRNA) |
C -GAC G -AC ACGUUUUCCUCUUUCGUUUAA UUCUGAUGUAA AGC AGUUU UCUUUUCCAACAACUGAUAGA C G ||||||||||| ||| ||||| ||||||||||||||||||||| | AGGACUACAUU UUG UCAAA AGAAAGGGUUGUUGACUAUCU C A - AUUC A CGA GUUAUAGAAGUGCUAAUUUUG |
| Stem-loop sequence | UUCUGAUGUAACAGCGACAGUUUGUCUUUUCCAACAACUGAUAGAACCACGUUUUCCUCUUUCGUUUAAGAGUUUUAAUCGUGAAGAUAUUGCAGCUCUAUCAGUUGUUGGGAAAGAAAAACUCUUAGUUUUACAUCAGGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_001343986.1 |
|
2.5 | Arabidopsis thaliana GPI-anchored adhesin-like protein (TRM8), mRNA | GPI-anchored adhesin-like protein(TRM8) | coding protein | psRNATarget | |||||||||
| NM_122573.4 |
|
2.5 | Arabidopsis thaliana GPI-anchored adhesin-like protein (TRM8), mRNA | GPI-anchored adhesin-like protein(TRM8) | coding protein | psRNATarget |
| 1 | PMID:21357774
"MicroRNA activity in the Arabidopsis male germline"; Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD; J Exp Bot. 62:1611-1620(2011). |