ncRNA ID | bra-miR9553-3p |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA1:7994267-7994454 [+] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 121 - UAAUCAGCUCCAGCUAUGUACA - 142 |
Stem-loop(if miRNA) |
--------G CA -- CAACCAUGUACAAAGCUGAAGCUAAUUAUGUGAAGUAUGGUAAUCCCAUAAUUAGCUUAUAUUUUGGUAUUGGCUA GGG AGA GGG A ||| ||| ||| CCC UCU GGU G CAUGUGUCG UC AC UUGUUUCACCAUCUUACCCUUGGUACAUGUAUCGACCUCGACUAAUACACUUCAGUCCGUAUAUAAUCUAAGAUCA |
Stem-loop sequence | GGGGCAAGAGGGCAACCAUGUACAAAGCUGAAGCUAAUUAUGUGAAGUAUGGUAAUCCCAUAAUUAGCUUAUAUUUUGGUAUUGGCUAAGACUAGAAUCUAAUAUAUGCCUGACUUCACAUAAUCAGCUCCAGCUAUGUACAUGGUUCCCAUUCUACCACUUUGUUUGGCAUCUCUCCCGCUGUGUAC |
1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |