ncRNA ID | novel_gma_miR143 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:18972433-18972589 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628;SRR1294478;SRR1451633;SRR1451638;SRR1451639;SRR1294479;SRR1451642;SRR1451644;SRR1451645;SRR1451649;SRR1294485;SRR1753105;SRR1295525;SRR1295526;SRR1295527;SRR1451605;SRR1292928;SRR1451609;SRR1451610;SRR1451611;SRR1451619;SRR1451627 |
Length | 21 |
Mature sequence(if miRNA) | 137 - UGACACUAACCACCUCUGAAG - 157 |
Stem-loop(if miRNA) |
--UG        C            AAGC    C           U    -------------AGA    GGCCGCGGUGUAAUG     ACACUAAC ACCUCUGAAGUU    GAGA UACACAAAUUU CCAU                GAGA               U     |||||||| ||||||||||||    |||| ||||||||||| ||||                ||||               U     UGUGAUUG UGGGGACUUCAA    CUUU AUGUGUUUGGA GGUG                GUUG               U UUAG        A            AAUA    A           -    GAAUAUAUGGAUAUUG    GAAAUUAACAAACUU |
Stem-loop sequence | UGACACUAACCACCUCUGAAGUUAAGCGAGACUACACAAAUUUUCCAUAGAGAGAGGCCGCGGUGUAAUGUUUUUCAAACAAUUAAAGGUUGGUUAUAGGUAUAUAAGGUGGAGGUUUGUGUAAUUUCAUAAAACUUCAGGGGUAGUUAGUGUGAUU |