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BaseInfo

ncRNA ID novel_gma_miR143
Species Glycine max
Class miRNA
Genome position Chr20:18972433-18972589 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1294478;SRR1451633;SRR1451638;SRR1451639;SRR1294479;SRR1451642;SRR1451644;SRR1451645;SRR1451649;SRR1294485;SRR1753105;SRR1295525;SRR1295526;SRR1295527;SRR1451605;SRR1292928;SRR1451609;SRR1451610;SRR1451611;SRR1451619;SRR1451627
Length 21
Mature sequence(if miRNA) 137 - UGACACUAACCACCUCUGAAG - 157
Stem-loop(if miRNA) --UG        C            AAGC    C           U    -------------AGA    GGCCGCGGUGUAAUG
    ACACUAAC ACCUCUGAAGUU    GAGA UACACAAAUUU CCAU                GAGA               U
    |||||||| ||||||||||||    |||| ||||||||||| ||||                ||||               U
    UGUGAUUG UGGGGACUUCAA    CUUU AUGUGUUUGGA GGUG                GUUG               U
UUAG        A            AAUA    A           -    GAAUAUAUGGAUAUUG    GAAAUUAACAAACUU
Stem-loop sequence UGACACUAACCACCUCUGAAGUUAAGCGAGACUACACAAAUUUUCCAUAGAGAGAGGCCGCGGUGUAAUGUUUUUCAAACAAUUAAAGGUUGGUUAUAGGUAUAUAAGGUGGAGGUUUGUGUAAUUUCAUAAAACUUCAGGGGUAGUUAGUGUGAUU