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BaseInfo

ncRNA ID novel_gma_miR130
Species Glycine max
Class miRNA
Genome position Chr19:44145742-44145863 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628
Length 19
Mature sequence(if miRNA) 1 - UUGUUGAUCUGUGUGAGUC - 19
Stem-loop(if miRNA) --             U    CU                UUUUU   U         AAUAA
  CUCAUAUAGAUCA CAAU  GUAUGAGUUUUUUUAA     AAU AUUUUAAAA     C
  ||||||||||||| ||||  ||||||||||||||||     ||| |||||||||
  GAGUGUGUCUAGU GUUA  UAUACUCAAAAAAAUU     UUA UAAAAUUUU     U
CU             U    UG                UUUUU   U         AAACA
Stem-loop sequence CUCAUAUAGAUCAUCAAUCUGUAUGAGUUUUUUUAAUUUUUAAUUAUUUUAAAAAAUAACUACAAAUUUUAAAAUUAUUUUUUUUUAAAAAAACUCAUAUGUAUUGUUGAUCUGUGUGAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535627.2
ncRNA:19   CUGAGUGUGUCUAGUUGUU   1
  *||||||*|||||||||||
targets:314   AACUCACUCAGAUCAACAA   332

2.5 PREDICTED: Glycine max agamous-like MADS-box protein AGL62 (LOC100794751), mRNA agamous-like MADS-box protein AGL62(LOC100794751) coding protein psRNATarget