ncRNA ID | novel_gma_miR130 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:44145742-44145863 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628 |
Length | 19 |
Mature sequence(if miRNA) | 1 - UUGUUGAUCUGUGUGAGUC - 19 |
Stem-loop(if miRNA) |
--             U    CU                UUUUU   U         AAUAA   CUCAUAUAGAUCA CAAU  GUAUGAGUUUUUUUAA     AAU AUUUUAAAA     C   ||||||||||||| ||||  ||||||||||||||||     ||| |||||||||   GAGUGUGUCUAGU GUUA  UAUACUCAAAAAAAUU     UUA UAAAAUUUU     U CU             U    UG                UUUUU   U         AAACA |
Stem-loop sequence | CUCAUAUAGAUCAUCAAUCUGUAUGAGUUUUUUUAAUUUUUAAUUAUUUUAAAAAAUAACUACAAAUUUUAAAAUUAUUUUUUUUUAAAAAAACUCAUAUGUAUUGUUGAUCUGUGUGAGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003535627.2 |
|
2.5 | PREDICTED: Glycine max agamous-like MADS-box protein AGL62 (LOC100794751), mRNA | agamous-like MADS-box protein AGL62(LOC100794751) | coding protein | psRNATarget |