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BaseInfo

ncRNA ID novel_gma_miR126
Species Glycine max
Class miRNA
Genome position Chr19:37282350-37282424 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451631;SRR1451632;SRR1451633;SRR1451634;SRR1451635;SRR1451636;SRR1451637;SRR1451638;SRR1451639;SRR1451640;SRR1451641;SRR1451642;SRR1451644;SRR1451646;SRR1451647;SRR1451648;SRR1451649;SRR1451653;SRR1451658;SRR1451661;SRR1451662;SRR1451663;SRR1451664;SRR3067737;SRR835759;SRR835761;SRR835762;SRR835765;SRR835766;SRR835768;SRR835770;SRR835771;SRR835772;SRR835773;SRR1451604;SRR1451611;SRR1451613;SRR1451615;SRR1451616;SRR1451617;SRR1451618;SRR1451619;SRR1451620;SRR1451621;SRR1451623;SRR1451624;SRR1451625;SRR1451626;SRR1451627
Length 21
Mature sequence(if miRNA) 55 - UUAAAGUAUAGGGACCAAAUU - 75
Stem-loop(if miRNA) --    A     U      --U       A -U   UUU
  UUUG UUCCU UACUUU   AAAAAUA G  UGA   A
  |||| ||||| ||||||   ||||||| |  |||
  AAAC AGGGA AUGAAA   UUUUUAU C  GCU   G
UU    C     U      UUU       C UU   CCU
Stem-loop sequence UUUGAUUCCUUUACUUUUAAAAAUAAGUUGAUUUAGUCCUCGUUCCUAUUUUUUUUAAAGUAUAGGGACCAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003533061.3
ncRNA:21   UUAAACCAGGGAUAUGAAAUU   1
  =*|||||||||||||||||||
targets:1640   GUUUUGGUCCCUAUACUUUAA   1660

0.0 PREDICTED: Glycine max uncharacterized lipoprotein syc1174_c-like (LOC100787317), mRNA uncharacterized lipoprotein syc1174_c-like(LOC100787317) coding protein psRNATarget
XM_006583838.2
ncRNA:21   UUAAACCAGGGAUAUGAAA-UU   1
  =*|||||||||||||||||-||
targets:3574   GUUUUGGUCCCUAUACUUUUAA   3595

3.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09900-like (LOC100775884), transcript variant X2, mRNA pentatricopeptide repeat-containing protein At1g09900-like(LOC100775884) coding protein psRNATarget
XM_006583837.2
ncRNA:21   UUAAACCAGGGAUAUGAAA-UU   1
  =*|||||||||||||||||-||
targets:3717   GUUUUGGUCCCUAUACUUUUAA   3738

3.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09900-like (LOC100775884), transcript variant X3, mRNA pentatricopeptide repeat-containing protein At1g09900-like(LOC100775884) coding protein psRNATarget