ncRNA ID | novel_gma_miR126 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:37282350-37282424 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628;SRR1451631;SRR1451632;SRR1451633;SRR1451634;SRR1451635;SRR1451636;SRR1451637;SRR1451638;SRR1451639;SRR1451640;SRR1451641;SRR1451642;SRR1451644;SRR1451646;SRR1451647;SRR1451648;SRR1451649;SRR1451653;SRR1451658;SRR1451661;SRR1451662;SRR1451663;SRR1451664;SRR3067737;SRR835759;SRR835761;SRR835762;SRR835765;SRR835766;SRR835768;SRR835770;SRR835771;SRR835772;SRR835773;SRR1451604;SRR1451611;SRR1451613;SRR1451615;SRR1451616;SRR1451617;SRR1451618;SRR1451619;SRR1451620;SRR1451621;SRR1451623;SRR1451624;SRR1451625;SRR1451626;SRR1451627 |
Length | 21 |
Mature sequence(if miRNA) | 55 - UUAAAGUAUAGGGACCAAAUU - 75 |
Stem-loop(if miRNA) |
--    A     U      --U       A -U   UUU   UUUG UUCCU UACUUU   AAAAAUA G  UGA   A   |||| ||||| ||||||   ||||||| |  |||   AAAC AGGGA AUGAAA   UUUUUAU C  GCU   G UU    C     U      UUU       C UU   CCU |
Stem-loop sequence | UUUGAUUCCUUUACUUUUAAAAAUAAGUUGAUUUAGUCCUCGUUCCUAUUUUUUUUAAAGUAUAGGGACCAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003533061.3 |
|
0.0 | PREDICTED: Glycine max uncharacterized lipoprotein syc1174_c-like (LOC100787317), mRNA | uncharacterized lipoprotein syc1174_c-like(LOC100787317) | coding protein | psRNATarget | |||||||||
XM_006583838.2 |
|
3.0 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09900-like (LOC100775884), transcript variant X2, mRNA | pentatricopeptide repeat-containing protein At1g09900-like(LOC100775884) | coding protein | psRNATarget | |||||||||
XM_006583837.2 |
|
3.0 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09900-like (LOC100775884), transcript variant X3, mRNA | pentatricopeptide repeat-containing protein At1g09900-like(LOC100775884) | coding protein | psRNATarget |