| ncRNA ID | bra-miR319-3p |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | chrA1:7428122-7428320 [+] |
| Reference genome | Brapa_1.1 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 172 - UUGGACUGAAGGGAGCUCCCU - 192 |
| Stem-loop(if miRNA) |
UUGUAGGGAUAUAUAUC A G UU CU G U A A - AC C C AA C --A AAA GAGGG GAGCUUCCUU AGUCCA CAGAGG GU A AUG UCCAAUU GUUU CCG UCAU CAU CA UA CGAGUU CU U ||||| |||||||||| |||||| |||||| || | ||| ||||||| |||| ||| |||| ||| || || |||||| || CUCUC CUCGAGGGAA UCAGGU GUUUCU UA U UAC AGGUUAA CAGA GGC AGUA GUA GU AU GCUCAG GA U -------------UUCU C G UG CU G - A A U GU A A AA U AUA AUU |
| Stem-loop sequence | UUGUAGGGAUAUAUAUCGAGGGAGAGCUUCCUUGAGUCCAUUCAGAGGCUGUGAUAUGAUCCAAUUAGUUUCCGACUCAUCCAUCCAAAUACCGAGUUACUAAAUUUUAAGAUAGACUCGUUAAAUGAAUGAAUGAUGCGGUAGACAAAUUGGAACAUUGAUUCUCUUUGGUUGGACUGAAGGGAGCUCCCUCUCUCUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009134603.2 |
|
2.5 | PREDICTED: Brassica rapa myb-related protein 306 (LOC103857427), mRNA | myb-related protein 306(LOC103857427) | coding protein | psRNATarget |
| 1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |