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BaseInfo

ncRNA ID novel_gma_miR122
Species Glycine max
Class miRNA
Genome position Chr19:1832837-1832900 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451632;SRR1451637;SRR1451639;SRR1451644;SRR1451657;SRR1451664;SRR1451604;SRR1451610;SRR1451618;SRR1451623;SRR1451627
Length 21
Mature sequence(if miRNA) 44 - UGAUACAGUGACUUACAAUUC - 64
Stem-loop(if miRNA) --                   AUUA G A   U
  AUUGUAAGUCACUGUAUUA    G A CUG U
  |||||||||||||||||||    | | ||| G
  UAACAUUCAGUGACAUAGU    C U GAU A
CU                   ---A G A   U
Stem-loop sequence AUUGUAAGUCACUGUAUUAAUUAGGAACUGUUGAUUAGAUGCAUGAUACAGUGACUUACAAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006581938.2
ncRNA:21   CUUAACAUUCAGUGACAUAGU   1
  |=|||||*||||||||*||||
targets:255   GGAUUGUUAGUCACUGAAUCA   275

2.5 PREDICTED: Glycine max exocyst complex component EXO70B1-like (LOC102669438), mRNA exocyst complex component EXO70B1-like(LOC102669438) coding protein psRNATarget
XM_006581936.2
ncRNA:21   CUUAACAUUCAGUGACAUAGU   1
  |=|||||*||||||||*||||
targets:349   GGAUUGUUAGUCACUGAAUCA   369

2.5 PREDICTED: Glycine max exocyst complex component EXO70B1-like (LOC102669093), mRNA exocyst complex component EXO70B1-like(LOC102669093) coding protein psRNATarget