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BaseInfo

ncRNA ID novel_gma_miR120
Species Glycine max
Class miRNA
Genome position Chr19:8449323-8449402 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451634;SRR1451643;SRR1451644;SRR1451646;SRR1451647
Length 21
Mature sequence(if miRNA) 60 - UCAAAAUUGAUGUGGUAUAGC - 80
Stem-loop(if miRNA) --                           AAU    A UAU
  UAUACCACAUCGGUUUUGGCCAAAAUC   GUUA A   G
  |||||||||||||||||||||||||||   |||| |
  AUAUGGUGUAGUUAAAACUGGUUUUAG   CAAU U   U
CG                           --C    A UUC
Stem-loop sequence UAUACCACAUCGGUUUUGGCCAAAAUCAAUGUUAAAUAUGUCUUUAUAACCGAUUUUGGUCAAAAUUGAUGUGGUAUAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003520567.3
ncRNA:21   CGAUAUGGUGUAGUUAAAACU   1
  *=|||||*|||*|||||||||
targets:1097   CUUAUACAACAACAAUUUUGA   1117

2.5 PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXL2 (LOC100789665), mRNA leucine-rich repeat receptor-like protein kinase PXL2(LOC100789665) coding protein psRNATarget