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BaseInfo

ncRNA ID novel_gma_miR117
Species Glycine max
Class miRNA
Genome position Chr18:25832853-25832934 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628
Length 22
Mature sequence(if miRNA) 61 - AAAUUGUCUUAGAAUGUGUACC - 82
Stem-loop(if miRNA) -    UG        U U     C                A
 AAAU  UCUUAGAA G GUACC UUCUAAGAUGGUUUUU A
 ||||  |||||||| | ||||| ||||||||||||||||
 UUUA  AGAAUCUU C CAUGG AAGAUUCUGCCAAAAA C
U    GU        C -     A                U
Stem-loop sequence AAAUUGUCUUAGAAUGUGUACCCUUCUAAGAUGGUUUUUAACUAAAAACCGUCUUAGAAAGGUACCCUUCUAAGAUGAUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573596.2
ncRNA:22   CCAUGUGUAAGAUUCUGUUAAA   1
  |*||||=||||||||||||*||
targets:368   GUUACAUAUUCUAAGACAAGUU   389

2.5 PREDICTED: Glycine max cyclin-D5-1-like (LOC100808000), mRNA cyclin-D5-1-like(LOC100808000) coding protein psRNATarget