ncRNA ID | novel_gma_miR117 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:25832853-25832934 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628 |
Length | 22 |
Mature sequence(if miRNA) | 61 - AAAUUGUCUUAGAAUGUGUACC - 82 |
Stem-loop(if miRNA) |
-    UG        U U     C                A  AAAU  UCUUAGAA G GUACC UUCUAAGAUGGUUUUU A  ||||  |||||||| | ||||| ||||||||||||||||  UUUA  AGAAUCUU C CAUGG AAGAUUCUGCCAAAAA C U    GU        C -     A                U |
Stem-loop sequence | AAAUUGUCUUAGAAUGUGUACCCUUCUAAGAUGGUUUUUAACUAAAAACCGUCUUAGAAAGGUACCCUUCUAAGAUGAUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006573596.2 |
|
2.5 | PREDICTED: Glycine max cyclin-D5-1-like (LOC100808000), mRNA | cyclin-D5-1-like(LOC100808000) | coding protein | psRNATarget |