ncRNA ID | novel_gma_miR114 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:52437791-52437865 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628;SRR1451629;SRR1451633;SRR1451634;SRR1451635;SRR1451636;SRR1451638;SRR1451640;SRR1451641;SRR1451642;SRR1451643;SRR1451645;SRR1451646;SRR1451647;SRR1451654;SRR1451616;SRR1451617;SRR1451622;SRR1451624;SRR1451625;SRR1451626;SRR1451627 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCUGUUCCUUAUUAUAAGAAA - 21 |
Stem-loop(if miRNA) |
--          A                           UCUGUUCCUU UUAUAAGAAACAAGUUAUAGUGUAU   |||||||||| ||||||||||||||||||||||||U   AGACAAGGAA AAUAUUCUUUGUUCAAUAUCACAUU GG          A                         |
Stem-loop sequence | UCUGUUCCUUAUUAUAAGAAACAAGUUAUAGUGUAUUUUACACUAUAACUUGUUUCUUAUAAAAAGGAACAGAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003528082.3 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100814200 (LOC100814200), mRNA | uncharacterized LOC100814200(LOC100814200) | coding protein | psRNATarget | |||||||||
XM_003525989.3 |
|
2.5 | PREDICTED: Glycine max anthocyanidin 3-O-glucosyltransferase 5-like (LOC100810776), mRNA | anthocyanidin 3-O-glucosyltransferase 5-like(LOC100810776) | coding protein | psRNATarget | |||||||||
XM_003518994.3 |
|
2.5 | PREDICTED: Glycine max probable plastid-lipid-associated protein 13, chloroplastic (LOC100815867), transcript variant X1, mRNA | probable plastid-lipid-associated protein 13, chloroplastic(LOC100815867) | coding protein | psRNATarget |