ncRNA ID | novel_gma_miR113 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:6437279-6437362 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUCCGGAUGAACAAUUUGUUC - 21 |
Stem-loop(if miRNA) |
--      AU      U      UA      A         C   UUCCGG  GAACAA UUGUUC  CCGGAA AACCUUCUU C   ||||||  |||||| ||||||  |||||| |||||||||   AAGGCC  CUUGUU AACAAG  GGCUUU UUGGAAGAA G AG      AU      U      UA      C         G |
Stem-loop sequence | UUCCGGAUGAACAAUUUGUUCUACCGGAAAAACCUUCUUCCGGAAGAAGGUUCUUUCGGAUGAACAAUUUGUUCUACCGGAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006588641.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X1, mRNA | uncharacterized LOC102667717(LOC102667717) | coding protein | psRNATarget | |||||||||
XM_006588642.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X2, mRNA | uncharacterized LOC102667717(LOC102667717) | coding protein | psRNATarget |