ncRNA ID | novel_gma_miR108 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:12379988-12380077 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628 |
Length | 24 |
Mature sequence(if miRNA) | 67 - ACAUUCUAAGACAGUUAUUACAUC - 90 |
Stem-loop(if miRNA) |
-- C -AA ACA GU UGUAAUAAC GUCUUAGAA CUA UUCUAAGAUGGUU U ||||||||| ||||||||| ||| ||||||||||||| U ACAUUAUUG CAGAAUCUU GAU AAGAUUCUGCUAA A CU A ACA GAG GA |
Stem-loop sequence | UGUAAUAACCGUCUUAGAAAACUAACAUUCUAAGAUGGUUGUUUAAGAAUCGUCUUAGAAGAGUAGACAUUCUAAGACAGUUAUUACAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
1.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014767461.1 |
|
2.5 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget |