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BaseInfo

ncRNA ID novel_gma_miR103
Species Glycine max
Class miRNA
Genome position Chr10:21219202-21219383 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1294478;SRR1451631;SRR1451633;SRR1451635;SRR1294479;SRR1451643;SRR1451645;SRR1451646;SRR1451647;SRR1451649;SRR1451650;SRR1451652;SRR1451653;SRR1451654;SRR1451657;SRR1451658;SRR1451662;SRR1753107;SRR2045238;SRR1295527;SRR1451614;SRR1451616;SRR1451619;SRR1451620;SRR1451621;SRR1451622;SRR1451625;SRR1451626;SRR1451627
Length 22
Mature sequence(if miRNA) 161 - UCCUUGAUACUUUUUUUUAGUC - 182
Stem-loop(if miRNA) --                                   CA     UA            C    -AUUG                  GCCUU
  UCCUUGAUACUUUUUUUUAGUCCUUGAUAAAUUAG  AAUUU  UGUUUGCUCCUU AUAA     UUUUCAUUUGUUAUUAGU     U
  |||||||||||||||||||||||||||||||||||  |||||  |||||||||||| ||||     ||||||||||||||||||     G
  AGGAACUGUGAAAAAAAAUCAGGAACUAUUUAAUC  UUAAA  GCAAACGAGGGA UAUU     AAAAGUAAACAAUAAUCA     A
CC                                   AC     UC            C    AAGAA                  GUAAA
Stem-loop sequence UCCUUGAUACUUUUUUUUAGUCCUUGAUAAAUUAGCAAAUUUUAUGUUUGCUCCUUCAUAAAUUGUUUUCAUUUGUUAUUAGUGCCUUUGAAAAUGACUAAUAACAAAUGAAAAAAGAAUUAUCAGGGAGCAAACGCUAAAUUCACUAAUUUAUCAAGGACUAAAAAAAAGUGUCAAGGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574188.1
ncRNA:21   UGAUUUUUUUUCAUAGUUCCU   1
  |=*||=||||||||||||||*
targets:1   AUGAAGAAAAAGUAUCAAGGU   21

3.0 PREDICTED: Glycine max uncharacterized LOC102662275 (LOC102662275), mRNA uncharacterized LOC102662275(LOC102662275) coding protein psRNATarget
XM_006589846.2
ncRNA:21   UGAUUUUUUUUCAUAGUUCCU   1
  |=*||=||||||||||||||*
targets:1   AUGAAGAAAAAGUAUCAAGGU   21

3.0 PREDICTED: Glycine max uncharacterized LOC102663383 (LOC102663383), mRNA uncharacterized LOC102663383(LOC102663383) coding protein psRNATarget