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BaseInfo

ncRNA ID novel_gma_miR102
Species Glycine max
Class miRNA
Genome position Chr17:27300089-27300138 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451630
Length 21
Mature sequence(if miRNA) 30 - GUUAAGAAUCGUCUUAGAAGG - 50
Stem-loop(if miRNA) --GUU                   U
     AAGAAUCGUCUUAGAAGGA G
     |||||||||||||||||||
     UUUUUAGCAGAAUCUUUUU U
GGUAU                   C
Stem-loop sequence GUUAAGAAUCGUCUUAGAAGGAUGUCUUUUUCUAAGACGAUUUUUUAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001255257.2
ncRNA:21   GGAAGAUUCUGCUAAGAAUUG   1
  ****=||||||||||||||||
targets:996   AAAAUUAAGACGAUUCUUAAC   1016

3.0 Glycine max translin-associated protein X-like (LOC100776523), mRNA translin-associated protein X-like(LOC100776523) coding protein psRNATarget
BT097484.1
ncRNA:21   GGAAGAUUCUGCUAAGAAUUG   1
  ****=||||||||||||||||
targets:998   AAAAUUAAGACGAUUCUUAAC   1018

3.0 Soybean clone JCVI-FLGm-16M17 unknown mRNA NA coding protein psRNATarget