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BaseInfo

ncRNA ID novel_gma_miR100
Species Glycine max
Class miRNA
Genome position Chr18:2372229-2372327 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478;SRR1294479
Length 24
Mature sequence(if miRNA) 76 - AUUGAUUUUAGCUUAUGGGAGAAU - 99
Stem-loop(if miRNA) --                     C   UGU   U        C   -  UA
  UCUCUCAUAAGCUAAAAUCAA UUA   GCA CUUAACUU UAU GA  G
  ||||||||||||||||||||| |||   ||| |||||||| ||| ||  U
  AGAGGGUAUUCGAUUUUAGUU AAU   CGU GAAUUGAA AUA CU  G
UA                     A   --U   -        A   U  UC
Stem-loop sequence UCUCUCAUAAGCUAAAAUCAACUUAUGUGCAUCUUAACUUCUAUGAUAGUGCUUCUAUAAAAGUUAAGUGCUUAAAUUGAUUUUAGCUUAUGGGAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK286967.1
ncRNA:24   UAAGAGGGUAUUCGAUUUUAGUUA   1
  *|||||||*|||*|||||||||||
targets:484   CUUCUCCCUUAAACUAAAAUCAAU   507

2.5 Glycine max cDNA, clone: GMFL01-41-C10 NA coding protein psRNATarget