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BaseInfo

ncRNA ID novel_gma_miR97
Species Glycine max
Class miRNA
Genome position Chr17:37469980-37470064 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR2968974;SRR3160566;SRR835759;SRR835762;SRR835766;SRR835772;SRR1451626
Length 23
Mature sequence(if miRNA) 63 - GCUCACUACUCUUUCUGUCGGUU - 85
Stem-loop(if miRNA) --         -   -          A       CU       A
  UUGACAGAA GAG AGUGAGCACA AGAGGCA  UGAUAUA A
  ||||||||| ||| |||||||||| |||||||  |||||||
  GGCUGUCUU CUC UCACUCGUGU UUUUCGU  ACUAUAU U
UU         U   A          G       -C       C
Stem-loop sequence UUGACAGAAGAGAGUGAGCACAAAGAGGCACUUGAUAUAAAUCUAUAUCACUGCUUUUGUGUGCUCACUACUCUUUCUGUCGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410467.1
ncRNA:23   UUGGCUGUCUUUCUCAUCACUCG   1
  |||||||||||||||||||||||
targets:6   AACCGACAGAAAGAGUAGUGAGC   28

0.0 Sequence 8592 from Patent EP2074227 NA coding protein psRNATarget
LQ242597.1
ncRNA:23   UUGGCUGUCUUUCUCAUCACUCG   1
  |||||||||||||||||||||||
targets:6   AACCGACAGAAAGAGUAGUGAGC   28

0.0 Sequence 8592 from Patent EP2985353 NA coding protein psRNATarget
JB170928.1
ncRNA:23   UUGGCUGUCUUUCUCAUCACUCG   1
  |||||||||||||||||||||||
targets:6   AACCGACAGAAAGAGUAGUGAGC   28

0.0 Sequence 8592 from Patent EP2559767 NA coding protein psRNATarget
XM_006587895.2
ncRNA:23   UUGGCUGUCUUUCUCAUCACUCG   1
  *|=*||*|||||||||||||||*
targets:718   CAUAGAAAGAAAGAGUAGUGAGG   740

2.0 PREDICTED: Glycine max myosin-7-like (LOC100791031), transcript variant X1, mRNA myosin-7-like(LOC100791031) coding protein psRNATarget
XM_014762487.1
ncRNA:23   UUGGCUGUCUUUCUCAUCACUCG   1
  *|=*||*|||||||||||||||*
targets:719   CAUAGAAAGAAAGAGUAGUGAGG   741

2.0 PREDICTED: Glycine max myosin-7-like (LOC100791031), transcript variant X2, mRNA myosin-7-like(LOC100791031) coding protein psRNATarget
XM_014768596.1
ncRNA:23   UUGGCUGUCUUUCUCAUCACUCG   1
  ||--|||||=|||||*|||||||
targets:853   AA--GACAGGAAGAGCAGUGAGC   873

2.5 PREDICTED: Glycine max metallophosphoesterase 1-like (LOC102667430), mRNA metallophosphoesterase 1-like(LOC102667430) coding protein psRNATarget