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BaseInfo

ncRNA ID novel_gma_miR96
Species Glycine max
Class miRNA
Genome position Chr17:5926155-5926240 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1294480;SRR1451653;SRR1451664;SRR2045228;SRR1295516;SRR2968974;SRR835762;SRR835765;SRR835768;SRR835771;SRR1295519;SRR1451610
Length 21
Mature sequence(if miRNA) 1 - AGAGAUGUAUGGAGUGAGAGA - 21
Stem-loop(if miRNA) --   -                  A     AU  UAUU UC    
  AGA GAUGUAUGGAGUGAGAGA GGGAA  GA    U  CGAUC
  ||| |||||||||||||||||| |||||  ||    |  ||||C
  UCU CUACAUACCUUACUCUCU CCCUU  CU    A  GCUAC
AG   G                  -     CU  ---C UU    
Stem-loop sequence AGAGAUGUAUGGAGUGAGAGAAGGGAAAUGAUAUUUUCCGAUCCCAUCGUUACUCUCUUCCCUCUCUCAUUCCAUACAUCGUCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB171050.1
ncRNA:21   AGAGAGUGAGGUAUGUAGAGA   1
  |||||||||||||||||||||
targets:76   UCUCUCACUCCAUACAUCUCU   96

0.0 Sequence 8714 from Patent EP2559767 NA coding protein psRNATarget
HI410589.1
ncRNA:21   AGAGAGUGAGGUAUGUAGAGA   1
  |||||||||||||||||||||
targets:76   UCUCUCACUCCAUACAUCUCU   96

0.0 Sequence 8714 from Patent EP2074227 NA coding protein psRNATarget
LQ242719.1
ncRNA:21   AGAGAGUGAGGUAUGUAGAGA   1
  |||||||||||||||||||||
targets:76   UCUCUCACUCCAUACAUCUCU   96

0.0 Sequence 8714 from Patent EP2985353 NA coding protein psRNATarget
LQ242701.1
ncRNA:21   AGAGAGUGAGGUAUGUAGAGA   1
  ||||||||||||||||*||||
targets:76   UCUCUCACUCCAUACACCUCU   96

1.5 Sequence 8696 from Patent EP2985353 NA coding protein psRNATarget
HI410571.1
ncRNA:21   AGAGAGUGAGGUAUGUAGAGA   1
  ||||||||||||||||*||||
targets:76   UCUCUCACUCCAUACACCUCU   96

1.5 Sequence 8696 from Patent EP2074227 NA coding protein psRNATarget
JB171032.1
ncRNA:21   AGAGAGUGAGGUAUGUAGAGA   1
  ||||||||||||||||*||||
targets:76   UCUCUCACUCCAUACACCUCU   96

1.5 Sequence 8696 from Patent EP2559767 NA coding protein psRNATarget