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BaseInfo

ncRNA ID novel_gma_miR86
Species Glycine max
Class miRNA
Genome position Chr10:6821283-6821362 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451629;SRR1451630;SRR1451631;SRR1451632;SRR1451633;SRR1451634;SRR1451635;SRR1451636;SRR1451638;SRR1451639;SRR1451640;SRR1451641;SRR1451642;SRR1451643;SRR1451644;SRR1451646;SRR1451648;SRR1451649;SRR835766;SRR835767;DRR031984;SRR1451612;SRR1451613;SRR1451615;SRR1451616;SRR1451617;SRR1451618;SRR1451619;SRR1451620;SRR1451621;SRR1451622;SRR1451624;SRR1451626;SRR1451627
Length 21
Mature sequence(if miRNA) 1 - UUUUUGGUAGAUUUUGUUUCU - 21
Stem-loop(if miRNA) --UUU       A              U    AUUUUU  U
     UUGGUAG UUUUGUUUCUCAUU AAUG      UC C
     ||||||| |||||||||||||| ||||      ||
     AACCGUC AAAACGAAGAGUAA UUAU      AG C
UUGUU       C              C    --AUUU  U
Stem-loop sequence UUUUUGGUAGAUUUUGUUUCUCAUUUAAUGAUUUUUUCUCCUGAUUUAUAUUCAAUGAGAAGCAAAACCUGCCAAUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003556435.3
ncRNA:21   UCUUUGUUUUAGAUGGUUUUU   1
  ***|||||||||||||||||*
targets:3455   UCUAACAAAAUCUACCAAAAU   3475

2.0 PREDICTED: Glycine max putative E3 ubiquitin-protein ligase LIN (LOC100815587), transcript variant X2, mRNA putative E3 ubiquitin-protein ligase LIN(LOC100815587) coding protein psRNATarget
XM_006605461.2
ncRNA:21   UCUUUGUUUUAGAUGGUUUUU   1
  ***|||||||||||||||||*
targets:3495   UCUAACAAAAUCUACCAAAAU   3515

2.0 PREDICTED: Glycine max putative E3 ubiquitin-protein ligase LIN (LOC100815587), transcript variant X1, mRNA putative E3 ubiquitin-protein ligase LIN(LOC100815587) coding protein psRNATarget
XM_003551747.3
ncRNA:21   UCUUUGUUUUAGAUGGUUUUU   1
  |||||*||||||*||||||||
targets:1447   AGAAAGAAAAUCCACCAAAAA   1467

2.5 PREDICTED: Glycine max proline-rich receptor-like protein kinase PERK8 (LOC100784873), mRNA proline-rich receptor-like protein kinase PERK8(LOC100784873) coding protein psRNATarget
XM_003538578.3
ncRNA:21   UCUUUGUUUUAGAUGGUUUUU   1
  =*||||=|||||*||||||||
targets:367   GAAAACGAAAUCCACCAAAAA   387

2.5 PREDICTED: Glycine max uncharacterized LOC100792492 (LOC100792492), mRNA uncharacterized LOC100792492(LOC100792492) coding protein psRNATarget