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BaseInfo

ncRNA ID novel_gma_miR75
Species Glycine max
Class miRNA
Genome position Chr1:6340687-6340797 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628
Length 21
Mature sequence(if miRNA) 1 - UUCAUACGGAUGAAGUUCAUC - 21
Stem-loop(if miRNA) --U                -   CA   A   U                CAAU    C
   UCAUACGGAUGAAGUU CAU  AUA AUG AACUUCAUUCGUAUGG    UCAU C
   |||||||||||||||| |||  ||| ||| ||||||||||||||||    ||||
   AGUAUGCUUACUUCAA GUA  UGU UAC UUGAAGUAGGCAUACU    AGUA G
GAC                U   AA   C   -                ---C    U
Stem-loop sequence UUCAUACGGAUGAAGUUCAUCAAUAAAUGUAACUUCAUUCGUAUGGCAAUUCAUCCGUAUGACUCAUACGGAUGAAGUUCAUCUGUAAAUGUAACUUCAUUCGUAUGACAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003520377.2
ncRNA:21   CUACUUGAAGUAGGCAUACUU   1
  ||||||*|||||||||||||*
targets:1915   GAUGAAGUUCAUCCGUAUGAC   1935

2.0 PREDICTED: Glycine max phospholipase A(1) DAD1, chloroplastic-like (LOC100788424), mRNA phospholipase A(1) DAD1, chloroplastic-like(LOC100788424) coding protein psRNATarget
XM_003520377.2
ncRNA:21   CUACUUGAAGUAGGCAUACUU   1
  *|||*|||||||||||||||*
targets:1943   AAUGUACUUCAUCCGUAUGAC   1963

2.0 PREDICTED: Glycine max phospholipase A(1) DAD1, chloroplastic-like (LOC100788424), mRNA phospholipase A(1) DAD1, chloroplastic-like(LOC100788424) coding protein psRNATarget