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BaseInfo

ncRNA ID	bra-miR9566-3p
Species	Brassica rapa
Class	miRNA
Genome position	chrA1:4945796-4946013 [-]
Reference genome	Brapa_1.1
Source	miRBase
Length	24
Mature sequence(if miRNA)	11 - GAGCCUAAGUAUUUGUCAACAAUG - 34
Stem-loop(if miRNA)	UCUGUAAUCUC        UAUUCGAAUUUAUACCGAAGUAGGGGACCAGCUCUAUCAAUCAAAAACCAAACUUCAUUGUUGACAAAUACUUAGGCUCUCUCUAGGUAAAAGA            UUGGUAUG                                                                                              A            ||||||||                                                                                              U            UUGGUUUG                                                                                              C -----------        AAGUAACAACUGUUUAUGAAUCCGAGAGAGAUCCAUUUUCUUAGUAGUAUAGAAAAUCAAACAUCAUCGACAGAAAUUGUGAUUUUCUAUACUA
Stem-loop sequence	UCUGUAAUCUCUUGGUAUGUAUUCGAAUUUAUACCGAAGUAGGGGACCAGCUCUAUCAAUCAAAAACCAAACUUCAUUGUUGACAAAUACUUAGGCUCUCUCUAGGUAAAAGAAUCAUCAUAUCUUUUAGUGUUAAAGACAGCUACUACAAACUAAAAGAUAUGAUGAUUCUUUUACCUAGAGAGAGCCUAAGUAUUUGUCAACAAUGAAGUUUGGUU

Reference

1	PMID:24559317 "Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014).