ncRNA ID | novel_gma_miR64 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:22614332-22614420 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628;SRR1451631;SRR1451632;SRR1451633;SRR1451636;SRR1451637;SRR1451639;SRR1451644;SRR1451645;SRR1451616;SRR1451623;SRR1451625 |
Length | 21 |
Mature sequence(if miRNA) | 69 - UUGCACACAAUAUCUUUGCCU - 89 |
Stem-loop(if miRNA) |
--       CA             ----    -    A       CC   UUGCACA  AUAUCUUUGCCUU    ACUU UACA UAUCUCU  U   |||||||  |||||||||||||    |||| |||| |||||||   AACGUGU  UAUGGGAACGGAA    UGGG AUGU AUGGGGG  U CU       AG             AAAU    C    C       AA |
Stem-loop sequence | UUGCACACAAUAUCUUUGCCUUACUUUACAAUAUCUCUCCUUAAGGGGGUACUGUACGGGUUAAAAAGGCAAGGGUAUGAUGUGCAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003521428.3 |
|
2.5 | PREDICTED: Glycine max probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (LOC100785784), transcript variant X2, mRNA | probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY(LOC100785784) | coding protein | psRNATarget | |||||||||
XM_006577022.2 |
|
2.5 | PREDICTED: Glycine max probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (LOC100785784), transcript variant X1, mRNA | probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY(LOC100785784) | coding protein | psRNATarget |