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BaseInfo

ncRNA ID novel_gma_miR64
Species Glycine max
Class miRNA
Genome position Chr14:22614332-22614420 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451631;SRR1451632;SRR1451633;SRR1451636;SRR1451637;SRR1451639;SRR1451644;SRR1451645;SRR1451616;SRR1451623;SRR1451625
Length 21
Mature sequence(if miRNA) 69 - UUGCACACAAUAUCUUUGCCU - 89
Stem-loop(if miRNA) --       CA             ----    -    A       CC
  UUGCACA  AUAUCUUUGCCUU    ACUU UACA UAUCUCU  U
  |||||||  |||||||||||||    |||| |||| |||||||
  AACGUGU  UAUGGGAACGGAA    UGGG AUGU AUGGGGG  U
CU       AG             AAAU    C    C       AA
Stem-loop sequence UUGCACACAAUAUCUUUGCCUUACUUUACAAUAUCUCUCCUUAAGGGGGUACUGUACGGGUUAAAAAGGCAAGGGUAUGAUGUGCAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003521428.3
ncRNA:21   UCCGUUUCUAUAACACACGUU   1
  =|||||=||||*|||||||||
targets:2464   GGGCAAGGAUACUGUGUGCAA   2484

2.5 PREDICTED: Glycine max probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (LOC100785784), transcript variant X2, mRNA probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY(LOC100785784) coding protein psRNATarget
XM_006577022.2
ncRNA:21   UCCGUUUCUAUAACACACGUU   1
  =|||||=||||*|||||||||
targets:2497   GGGCAAGGAUACUGUGUGCAA   2517

2.5 PREDICTED: Glycine max probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (LOC100785784), transcript variant X1, mRNA probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY(LOC100785784) coding protein psRNATarget