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BaseInfo

ncRNA ID novel_gma_miR46
Species Glycine max
Class miRNA
Genome position Chr13:34844303-34844403 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628
Length 21
Mature sequence(if miRNA) 1 - UCGGAGAAAAUGCACGUUAUA - 21
Stem-loop(if miRNA) --UC  A              U   C   -    AAC     G  -   UGG
    GG GAAAAUGCACGUUA AUA UUU UUAA   UUCUG UC UGG   U
    || |||||||||||||| ||| ||| ||||   ||||| || |||
    CC CUUUUACGUGCAAU UAU AAA AAUU   AAGAC AG ACU   A
AAAA  C              U   A   C    ACA     -  U   UGC
Stem-loop sequence UCGGAGAAAAUGCACGUUAUAUACUUUUUAAAACUUCUGGUCUGGUGGUACGUUCAUGACAGAAACAUUAACAAAAUAUUUAACGUGCAUUUUCCCCAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006578658.2
ncRNA:21   AUAUUGCACGUAAAAGAGGCU   1
  *|||||*||||||||||||*|
targets:82   CAUAACUUGCAUUUUCUCCAA   102

2.5 PREDICTED: Glycine max transcription factor bHLH137-like (LOC100796018), mRNA transcription factor bHLH137-like(LOC100796018) coding protein psRNATarget