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BaseInfo

ncRNA ID novel_gma_miR42
Species Glycine max
Class miRNA
Genome position Chr13:24629305-24629370 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451629;SRR1451630;SRR1451633;SRR1451640;SRR1451641;SRR1451642;SRR1451643
Length 24
Mature sequence(if miRNA) 43 - AUUUUUUAAGACUGAGUCUGGCCU - 66
Stem-loop(if miRNA) --      ACA            C    GCUUA
  GUCAGA   GGUUUUAAAAGA UUGA     G
  ||||||   |||||||||||| ||||     U
  CGGUCU   UCAGAAUUUUUU AAUU     U
UC      GAG            -    AGCAU
Stem-loop sequence GUCAGAACAGGUUUUAAAAGACUUGAGCUUAGUUUACGAUUAAUUUUUUAAGACUGAGUCUGGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003545352.3
ncRNA:24   UCCGGUCUGAGUCAGAAUUUUUUA   1
  ||*|=||||||||||*|||||||*
targets:363   AGCCUAGACUCAGUCGUAAAAAAC   386

2.5 PREDICTED: Glycine max L-type lectin-domain containing receptor kinase IX.1-like (LOC100801935), mRNA L-type lectin-domain containing receptor kinase IX.1-like(LOC100801935) coding protein psRNATarget