ncRNA ID | novel_gma_miR42 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:24629305-24629370 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451628;SRR1451629;SRR1451630;SRR1451633;SRR1451640;SRR1451641;SRR1451642;SRR1451643 |
Length | 24 |
Mature sequence(if miRNA) | 43 - AUUUUUUAAGACUGAGUCUGGCCU - 66 |
Stem-loop(if miRNA) |
--      ACA            C    GCUUA   GUCAGA   GGUUUUAAAAGA UUGA     G   ||||||   |||||||||||| ||||     U   CGGUCU   UCAGAAUUUUUU AAUU     U UC      GAG            -    AGCAU |
Stem-loop sequence | GUCAGAACAGGUUUUAAAAGACUUGAGCUUAGUUUACGAUUAAUUUUUUAAGACUGAGUCUGGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003545352.3 |
|
2.5 | PREDICTED: Glycine max L-type lectin-domain containing receptor kinase IX.1-like (LOC100801935), mRNA | L-type lectin-domain containing receptor kinase IX.1-like(LOC100801935) | coding protein | psRNATarget |