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BaseInfo

ncRNA ID novel_gma_miR41
Species Glycine max
Class miRNA
Genome position Chr13:15432059-15432163 [+]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451629;SRR1451630;SRR1451631;SRR1451632;SRR1451633;SRR1451634;SRR1451635;SRR1451636;SRR1451637;SRR1451638;SRR1451639;SRR1451640;SRR1451641;SRR1451642;SRR1451643;SRR1451644;SRR1451646;SRR1451647;SRR1451648;SRR1451649;SRR1451650;SRR1451657;SRR1294484;SRR1451658;SRR1451661;SRR1451663;SRR1294485;SRR1753105;SRR1753107;SRR1753108;SRR2045230;SRR2045235;SRR3160566;SRR3160569;SRR1295517;SRR1295525;SRR1295526;SRR1295527;SRR1295530;SRR1451604;SRR1292928;SRR1451605;SRR1451606;SRR1451607;SRR1451608;SRR1451611;SRR1292924;SRR1451615;SRR1451616;SRR1451617;SRR1451618;SRR1451619;SRR1294476;SRR1451620;SRR1451621;SRR1451622;SRR1451623;SRR1451624;SRR1451625;SRR1294478;SRR1451626
Length 22
Mature sequence(if miRNA) 84 - UUGGGAAUUAAAAUGUAAACUU - 105
Stem-loop(if miRNA) --                         CCUUG    C   A  CA      A
  GUUUAUAUUUUAAUUUUUAAAAGGU     UUGU AAA UU  UUAACU A
  |||||||||||||||||||||||||     |||| ||| ||  |||||| C
  CAAAUGUAAAAUUAAGGGUUUUCUA     AGCA UUU AA  AAUUGA G
UU                         AAAAA    A   A  AA      G
Stem-loop sequence GUUUAUAUUUUAAUUUUUAAAAGGUCCUUGUUGUCAAAAUUCAUUAACUAACGGAGUUAAAAAAAUUUAACGAAAAAAAUCUUUUGGGAAUUAAAAUGUAAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098127.1
ncRNA:22   UUCAAAUGUAAAAUUAAGGGUU   1
  =**|||=|||||||||*|||||
targets:390   GCAUUUGCAUUUUAAUCCCCAA   411

2.5 Soybean clone JCVI-FLGm-12G1 unknown mRNA NA coding protein psRNATarget