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BaseInfo

ncRNA ID	novel_gma_miR40
Species	Glycine max
Class	miRNA
Genome position	Chr13:131822-131938 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451628;SRR1451634
Length	21
Mature sequence(if miRNA)	1 - AUCUUCAUCGUCAUGUCCAUC - 21
Stem-loop(if miRNA)	--      A  G    G    UC       --A    UAA UC   -CCC    G         AUCUUC UC UCAU UCCA  ACAUGUU   AAAU   G  UGG    UAUC AUGAUGA   |||||| || |||| ||||  |||||||   ||||   |  |||    |||| ||||||U   UAGAAG AG GGUA AGGU  UGUACAA   UUUG   C  AUC    GUAG UAUUAUG GC      A  G    -    -U       GAC    -UA GA   CAAC    G
Stem-loop sequence	AUCUUCAUCGUCAUGUCCAUCACAUGUUAAAAUUAAGUCUGGCCCUAUCGAUGAUGAUGUAUUAUGGAUGCAACCUAAGCAUGUUUCAGAACAUGUUUGGAAUGGGGAAGAAGAUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006593977.2	ncRNA:21   CUACCUGUACUGCUACUUCUA   1   ||||||*|||||||||||||* targets:575   GAUGGAGAUGACGAUGAAGAA   595 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X5, mRNA	uncharacterized LOC100793067(LOC100793067)	coding protein	psRNATarget
XM_006593975.2	ncRNA:21   CUACCUGUACUGCUACUUCUA   1   ||||||*|||||||||||||* targets:630   GAUGGAGAUGACGAUGAAGAA   650 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X4, mRNA	uncharacterized LOC100793067(LOC100793067)	coding protein	psRNATarget
XM_006593974.2	ncRNA:21   CUACCUGUACUGCUACUUCUA   1   ||||||*|||||||||||||* targets:633   GAUGGAGAUGACGAUGAAGAA   653 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X3, mRNA	uncharacterized LOC100793067(LOC100793067)	coding protein	psRNATarget
XM_003542387.3	ncRNA:21   CUACCUGUACUGCUACUUCUA   1   ||||||*|||||||||||||* targets:636   GAUGGAGAUGACGAUGAAGAA   656 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X2, mRNA	uncharacterized LOC100793067(LOC100793067)	coding protein	psRNATarget
XM_006593973.2	ncRNA:21   CUACCUGUACUGCUACUUCUA   1   ||||||*|||||||||||||* targets:639   GAUGGAGAUGACGAUGAAGAA   659 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X1, mRNA	uncharacterized LOC100793067(LOC100793067)	coding protein	psRNATarget
XM_003533712.3	ncRNA:21   CUACCUGUACUGCUACUUCUA   1   ||||||*||||||||||=||| targets:1051   GAUGGAGAUGACGAUGAGGAU   1071 Target Full Sequence	2.5	PREDICTED: Glycine max nucleosome assembly protein 1;3-like (LOC100783783), transcript variant X2, mRNA	nucleosome assembly protein 1;3-like(LOC100783783)	coding protein	psRNATarget
XM_003533713.3	ncRNA:21   CUACCUGUACUGCUACUUCUA   1   ||||||*||||||||||=||| targets:1050   GAUGGAGAUGACGAUGAGGAU   1070 Target Full Sequence	2.5	PREDICTED: Glycine max nucleosome assembly protein 1;3-like (LOC100783783), transcript variant X1, mRNA	nucleosome assembly protein 1;3-like(LOC100783783)	coding protein	psRNATarget