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BaseInfo

ncRNA ID novel_gma_miR33
Species Glycine max
Class miRNA
Genome position Chr12:10877616-10877670 [-]
Reference genome Glycine_max_v2.0
Source SRR1451628;SRR1451629;SRR1451630;SRR1451639;SRR1451640;SRR1451624;SRR1451625;SRR1451626
Length 22
Mature sequence(if miRNA) 34 - UUCUUCCGGAGAAGCUAUCGGA - 55
Stem-loop(if miRNA) --UUC   C       C        GA
     UUC GGAGAAG UAUCGGAA  A
     ||| ||||||| ||||||||  C
     AAG CCUCUUC AUAGCCUU  U
CCAAA   A       A        GU
Stem-loop sequence UUCUUCCGGAGAAGCUAUCGGAAGAACUUGUUCCGAUAACUUCUCCAGAAAAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006586476.1
ncRNA:22   AGGCUAUCGAAGAGGCCUUCUU   1
  ||||||||*||||||||||||=
targets:43   UCCGAUAGAUUCUCCGGAAGAG   64

2.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102667974), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102667974) coding protein psRNATarget