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BaseInfo

ncRNA ID novel_gma_miR25
Species Glycine max
Class miRNA
Genome position Chr10:14391487-14391530 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478
Length 20
Mature sequence(if miRNA) 1 - UCAGCAACGUCUUAGAAUGC - 20
Stem-loop(if miRNA) --      A      A   UGC
  UCAGCA CGUCUU GAA   C
  |||||| |||||| |||
  AGUUGU GUAGAA CUU   U
GG      G      A   UCA
Stem-loop sequence UCAGCAACGUCUUAGAAUGCCUACUUUCAAAGAUGGUGUUGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003536355.3
ncRNA:20   CGUAAGAUUCUGCAACGACU   1
  *|||||*||||*||||||||
targets:558   ACAUUCCAAGAAGUUGCUGA   577

2.5 PREDICTED: Glycine max ran-binding protein 1 homolog b-like (LOC100798469), mRNA ran-binding protein 1 homolog b-like(LOC100798469) coding protein psRNATarget
AK285585.1
ncRNA:20   CGUAAGAUUCUGCAACGACU   1
  *|||||*||||*||||||||
targets:567   ACAUUCCAAGAAGUUGCUGA   586

2.5 Glycine max cDNA, clone: GMFL01-13-B07 NA coding protein psRNATarget
XM_003556121.3
ncRNA:20   CGUAAGAUUCUGCAACGACU   1
  *|||||*||||*||||||||
targets:569   ACAUUCCAAGAAGUUGCUGA   588

2.5 PREDICTED: Glycine max ran-binding protein 1 homolog b (LOC100781537), mRNA ran-binding protein 1 homolog b(LOC100781537) coding protein psRNATarget