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BaseInfo

ncRNA ID novel_gma_miR21
Species Glycine max
Class miRNA
Genome position Chr8:4276160-4276263 [-]
Reference genome Glycine_max_v2.0
Source SRR1451627;SRR1451631;SRR1451654;SRR1451607
Length 22
Mature sequence(if miRNA) 1 - UUUUUAUUGAAUUCCAUCAAAU - 22
Stem-loop(if miRNA) --                           U        A      A    AA
  UUGAUGGAGUUUAAUAAAAAAUUUAGU UUGAUAUC CUGUCC AAGA  A
  ||||||||||||||||||||||||||| |||||||| |||||| ||||
  AACUACCUUAAGUUAUUUUUUAAAUCA AACUAUGG GACAGG UUCU  A
UA                           U        A      G    AU
Stem-loop sequence UUGAUGGAGUUUAAUAAAAAAUUUAGUUUUGAUAUCACUGUCCAAAGAAAAAUAUCUUGGGACAGAGGUAUCAAUACUAAAUUUUUUAUUGAAUUCCAUCAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001317572.1
ncRNA:22   UAAACUACCUUAAGUUAUUUUU   1
  |*||||||||||||*||||||=
targets:1228   AAUUGAUGGAAUUCUAUAAAAG   1249

2.5 Glycine max uncharacterized LOC100799629 (LOC100799629), mRNA uncharacterized LOC100799629(LOC100799629) coding protein psRNATarget
BT096655.1
ncRNA:22   UAAACUACCUUAAGUUAUUUUU   1
  |*||||||||||||*||||||=
targets:1229   AAUUGAUGGAAUUCUAUAAAAG   1250

2.5 Soybean clone JCVI-FLGm-21A11 unknown mRNA NA coding protein psRNATarget