ncRNA ID | novel_gma_miR21 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:4276160-4276263 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451627;SRR1451631;SRR1451654;SRR1451607 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUUUUAUUGAAUUCCAUCAAAU - 22 |
Stem-loop(if miRNA) |
--                           U        A      A    AA   UUGAUGGAGUUUAAUAAAAAAUUUAGU UUGAUAUC CUGUCC AAGA  A   ||||||||||||||||||||||||||| |||||||| |||||| ||||   AACUACCUUAAGUUAUUUUUUAAAUCA AACUAUGG GACAGG UUCU  A UA                           U        A      G    AU |
Stem-loop sequence | UUGAUGGAGUUUAAUAAAAAAUUUAGUUUUGAUAUCACUGUCCAAAGAAAAAUAUCUUGGGACAGAGGUAUCAAUACUAAAUUUUUUAUUGAAUUCCAUCAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001317572.1 |
|
2.5 | Glycine max uncharacterized LOC100799629 (LOC100799629), mRNA | uncharacterized LOC100799629(LOC100799629) | coding protein | psRNATarget | |||||||||
BT096655.1 |
|
2.5 | Soybean clone JCVI-FLGm-21A11 unknown mRNA | NA | coding protein | psRNATarget |