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BaseInfo

ncRNA ID novel_gma_miR5
Species Glycine max
Class miRNA
Genome position Chr7:33920924-33921096 [+]
Reference genome Glycine_max_v2.0
Source SRR1451627;SRR1451630;SRR1451631;SRR1451632;SRR1451633;SRR1451634;SRR1451635;SRR1451637;SRR1451639;SRR1451641;SRR1451644;SRR1451645;SRR1451646;SRR1451647;SRR1451649;SRR3160568;SRR1295531;SRR1451613;SRR1451615;SRR1451616;SRR1451621;SRR1451624;SRR1451625;SRR1451626
Length 24
Mature sequence(if miRNA) 150 - AGAAAACCGAUGUCAAUGUUGAUG - 173
Stem-loop(if miRNA) --UG                  GC                  AUGU            -AAUU  U   AA               U
    AACGUUGACAUUGGUUUU  AGUAAAACCGAUGUUAAU    UAUAUUAACAUC     UU UAG  AAACCGAUGUUAAUG A
    ||||||||||||||||||  ||||||||||||||||||    ||||||||||||     || |||  ||||||||||||||| A
    UUGUAACUGUAGCCAAAA  UCGUUUUGGCUACAAUUA    AUAUAAUUGUAG     AG AUC  UUUGGCUACAAUUAC U
GUAG                  GA                  CCUU            CCAAU  C   -C               A
Stem-loop sequence UGAACGUUGACAUUGGUUUUGCAGUAAAACCGAUGUUAAUAUGUUAUAUUAACAUCAAUUUUUUAGAAAAACCGAUGUUAAUGUAAUACAUUAACAUCGGUUUCCUACGAUAACCGAUGUUAAUAUAUUCCAUUAACAUCGGUUUUGCUAGAAAACCGAUGUCAAUGUUGAUG