ncRNA ID | novel_gma_miR5 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:33920924-33921096 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451627;SRR1451630;SRR1451631;SRR1451632;SRR1451633;SRR1451634;SRR1451635;SRR1451637;SRR1451639;SRR1451641;SRR1451644;SRR1451645;SRR1451646;SRR1451647;SRR1451649;SRR3160568;SRR1295531;SRR1451613;SRR1451615;SRR1451616;SRR1451621;SRR1451624;SRR1451625;SRR1451626 |
Length | 24 |
Mature sequence(if miRNA) | 150 - AGAAAACCGAUGUCAAUGUUGAUG - 173 |
Stem-loop(if miRNA) |
--UG                  GC                  AUGU            -AAUU  U   AA               U     AACGUUGACAUUGGUUUU  AGUAAAACCGAUGUUAAU    UAUAUUAACAUC     UU UAG  AAACCGAUGUUAAUG A     ||||||||||||||||||  ||||||||||||||||||    ||||||||||||     || |||  ||||||||||||||| A     UUGUAACUGUAGCCAAAA  UCGUUUUGGCUACAAUUA    AUAUAAUUGUAG     AG AUC  UUUGGCUACAAUUAC U GUAG                  GA                  CCUU            CCAAU  C   -C               A |
Stem-loop sequence | UGAACGUUGACAUUGGUUUUGCAGUAAAACCGAUGUUAAUAUGUUAUAUUAACAUCAAUUUUUUAGAAAAACCGAUGUUAAUGUAAUACAUUAACAUCGGUUUCCUACGAUAACCGAUGUUAAUAUAUUCCAUUAACAUCGGUUUUGCUAGAAAACCGAUGUCAAUGUUGAUG |