| ncRNA ID | bol-miR9408 |
| Species | Brassica oleracea |
| Class | miRNA |
| Genome position | NA |
| Reference genome | NA |
| Source | miRBase |
| Length | 23 |
| Mature sequence(if miRNA) | NA - GUUUCAUCUUAGAGAAUGUUGUC - NA |
| Stem-loop(if miRNA) |
------AAC UUUUGCUCAGGACAACAUUUUCAAGAUGGAAAAUGUUUUUGACUUAUGUAGCUGU GAG G ||| A CCU U UAACCAAGA GUUGUAAGAGAUUCUACUUUGUAUGAAAACUGAAUUGGCACCGACGCUUUUAAAC |
| Stem-loop sequence | AACGAGUUUUGCUCAGGACAACAUUUUCAAGAUGGAAAAUGUUUUUGACUUAUGUAGCUGUGAUCAAAUUUUCGCAGCCACGGUUAAGUCAAAAGUAUGUUUCAUCUUAGAGAAUGUUGUCCAGAACCAAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013782842.1 |
|
2.5 | PREDICTED: Brassica oleracea var. oleracea IRK-interacting protein-like (LOC106343589), transcript variant X2, mRNA | IRK-interacting protein-like(LOC106343589) | coding protein | psRNATarget | |||||||||
| XM_013782841.1 |
|
2.5 | PREDICTED: Brassica oleracea var. oleracea IRK-interacting protein-like (LOC106343589), transcript variant X1, mRNA | IRK-interacting protein-like(LOC106343589) | coding protein | psRNATarget | |||||||||
| XM_013730406.1 |
|
2.5 | PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106294761 (LOC106294761), mRNA | uncharacterized LOC106294761(LOC106294761) | coding protein | psRNATarget |
| 1 | PMID:24245539
"High-throughput sequencing identification of novel and conserved miRNAs in the Brassica oleracea leaves"; Lukasik A, Pietrykowska H, Paczek L, Szweykowska-Kulinska Z, Zielenkiewicz P; BMC Genomics. 14:801(2013). |