| ncRNA ID | bol-miR824 |
| Species | Brassica oleracea |
| Class | miRNA |
| Genome position | NA |
| Reference genome | NA |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | NA - UAGACCAUUUGUGAGAAGGGA - NA |
| Stem-loop(if miRNA) |
----- UG U U -UUUUUUGUUU G A UU ----AAUC UGAGUAUUAAGGAAAAUAGCUUGUUCAACAUAUCACACUACUCUUUUAGAAACAAUACUAUAUUUUAGAUGCUUUUCCAGCUUGAUAUACGUUGUUUUGUUAUGUAUAUCUGUAUUAUCCCGGCUACCAAAACGUUAAGAAAUAAGGUGAACAUCCUAAAACCUGCAUCCAAUUAGAAAGGUCUAGGUCACAGAUAUUACUUGUUAUCUCUUGAUUAAGCUAUUUUAUUUC CCUC GAGU UCUU CAUGUCUAGACCAUU GUGAGAAGGGA GCACC UUC CCCCACU C UGUAG U |||| |||| |||| ||||||||||||||| ||||||||||| ||||| ||| ||||||| | ||||| GGAG CUCA GGAG GUGUAGAUCUGGUAG UACUCUUCCCU CGUGG AAG GGGGUGA G AAUGA A UUACU GU C C UAUUAUNGGGU - - GG GUUCAAUA UACUUCAUUAGAUCACAUCGAUUCAUCACGUUCUAAGUUCAAGAAUCGAUAGUACUUUAUGGAGAUUGUGAGGUCUGUCUCCAAACUGUAGAGAAUCCGUUUUACAGACAGGCUUCACACCGUAUCAGGUUUUUGUUCCUUUUAUAAUACAUACGUCGUAGGUCUUUACAGUACUUACCUGAAUUACAUAAAAUCAAAUAUGAAUUGAGGACUUACUAGACUAGUACGACU |
| Stem-loop sequence | CCUCGAGUUGUCUUUCAUGUCUAGACCAUUUGUGAGAAGGGAUUUUUUGUUUGCACCGUUCACCCCACUUUCAAUCUGUAGUGAGUAUUAAGGAAAAUAGCUUGUUCAACAUAUCACACUACUCUUUUAGAAACAAUACUAUAUUUUAGAUGCUUUUCCAGCUUGAUAUACGUUGUUUUGUUAUGUAUAUCUGUAUUAUCCCGGCUACCAAAACGUUAAGAAAUAAGGUGAACAUCCUAAAACCUGCAUCCAAUUAGAAAGGUCUAGGUCACAGAUAUUACUUGUUAUCUCUUGAUUAAGCUAUUUUAUUUCUAUCAGCAUGAUCAGAUCAUUCAGGAGUUAAGUAUAAACUAAAAUACAUUAAGUCCAUUCAUGACAUUUCUGGAUGCUGCAUACAUAAUAUUUUCCUUGUUUUUGGACUAUGCCACACUUCGGACAGACAUUUUGCCUAAGAGAUGUCAAACCUCUGUCUGGAGUGUUAGAGGUAUUUCAUGAUAGCUAAGAACUUGAAUCUUGCACUACUUAGCUACACUAGAUUACUUCAUAGUAAAUAACUUGGGGAGUGGGGGAAGGUGCUGGGNUAUUAUUCCCUUCUCAUCGAUGGUCUAGAUGUGCGAGGUGACUCUCAUUGAGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013765253.1 |
|
1.0 | PREDICTED: Brassica oleracea var. oleracea agamous-like MADS-box protein AGL16 (LOC106327178), mRNA | agamous-like MADS-box protein AGL16(LOC106327178) | coding protein | psRNATarget | |||||||||
| XM_013740280.1 |
|
1.0 | PREDICTED: Brassica oleracea var. oleracea agamous-like MADS-box protein AGL16 (LOC106303917), mRNA | agamous-like MADS-box protein AGL16(LOC106303917) | coding protein | psRNATarget | |||||||||
| XM_013739921.1 |
|
3.0 | PREDICTED: Brassica oleracea var. oleracea transcription initiation factor TFIID subunit 14b (LOC106303630), mRNA | transcription initiation factor TFIID subunit 14b(LOC106303630) | coding protein | psRNATarget |
| 1 | PMID:17704216
"MicroRNA-mediated regulation of stomatal development in Arabidopsis"; Kutter C, Schob H, Stadler M, Meins F Jr, Si-Ammour A; Plant Cell. 19:2417-2429(2007). |