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BaseInfo

ncRNA ID bol-miR398a-5p
Species Brassica oleracea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - GGAGUGUCAUGAGAACACGGA - NA
Stem-loop(if miRNA) UC       A   U A           AUC   --UU     UUUAAG
  UCAAAGG GUG C UGAGAACACGG   CUC    GUUUC      A
  ||||||| ||| | |||||||||||   |||    |||||      U
  AGUUUCC CAC G ACUCUUGUGUU   GAG    CAAAG      U
-A       C   U G           -AU   UUAC     UCACCU
Stem-loop sequence UCUCAAAGGAGUGUCAUGAGAACACGGAUCCUCUUGUUUCUUUAAGAUUUCCACUGAAACCAUUGAGUAUUGUGUUCUCAGGUCACCCCUUUGAA

Reference

1 PMID:18558089
"Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica";
He XF, Fang YY, Feng L, Guo HS;
FEBS Lett. 582:2445-2452(2008).