ncRNA ID | bol-miR398a-3p |
Species | Brassica oleracea |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGUGUUCUCAGGUCACCCCUU - NA |
Stem-loop(if miRNA) |
UC       A   U A           AUC   --UU     UUUAAG   UCAAAGG GUG C UGAGAACACGG   CUC    GUUUC      A   ||||||| ||| | |||||||||||   |||    |||||      U   AGUUUCC CAC G ACUCUUGUGUU   GAG    CAAAG      U -A       C   U G           -AU   UUAC     UCACCU |
Stem-loop sequence | UCUCAAAGGAGUGUCAUGAGAACACGGAUCCUCUUGUUUCUUUAAGAUUUCCACUGAAACCAUUGAGUAUUGUGUUCUCAGGUCACCCCUUUGAA |
1 | PMID:18558089
"Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica"; He XF, Fang YY, Feng L, Guo HS; FEBS Lett. 582:2445-2452(2008). |